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Aliases : LOC_Os03g22540
Description : histone demethylase (KDM3). transcription factor (JUMONJI)
Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g22540.1 | |
| Cluster | HCCA: Cluster_143 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G11950 | No alias | Transcription factor jumonji (jmjC) domain-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g001620 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007698 | No alias | auxiliary component *(JMJ24) of COMPASS histone... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g010141 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059802 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16620 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05543 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g19024 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G069000.1 | Ceric.11G069000 | histone demethylase *(KDM3) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cre10.g446850 | No alias | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12281 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08650 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g35782 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_91724g0010 | No alias | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g19356 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25616 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007136 | No alias | histone demethylase *(KDM3) & original description: CDS=210-2957 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017153 | No alias | histone demethylase *(KDM3) & original description: CDS=3108-6380 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29690 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34370 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51855 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g21917 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025393_P001 | Zm00001e025393 | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038213_P003 | Zm00001e038213 | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| No external refs found! |