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  5. LOC_Os03g18650.1

LOC_Os03g18650.1 (LOC_Os03g18650)


Aliases : LOC_Os03g18650

Description : no hits & (original description: none)


Gene families : OG0012629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18650.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g40430.1 LOC_Os03g40430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g46900.1 LOC_Os03g46900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g01970.1 LOC_Os09g01970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!