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  5. LOC_Os03g18560.1

LOC_Os03g18560.1 (LOC_Os03g18560)


Aliases : LOC_Os03g18560

Description : Uncharacterized protein At5g01610 OS=Arabidopsis thaliana (sp|q9m015|y5161_arath : 239.0)


Gene families : OG0003080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18560.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00107960 evm_27.TU.AmTr_v1... Uncharacterized protein At5g01610 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G37070 No alias Protein of unknown function, DUF538 0.02 OrthoFinder output from all 47 species
Als_g42676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g06423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g09013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115640.3.1 Solyc03g115640 Uncharacterized protein At5g01610 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g015420.3.1 Solyc09g015420 Uncharacterized protein At5g01610 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g085300.2.1 Solyc10g085300 Uncharacterized protein At5g01610 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e001348_P001 Zm00001e001348 Uncharacterized protein At5g01610 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 55 159
No external refs found!