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  5. LOC_Os03g18020.1

LOC_Os03g18020.1 (LOC_Os03g18020)


Aliases : LOC_Os03g18020

Description : Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana (sp|q9sr92|str10_arath : 179.0)


Gene families : OG0001676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18020.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00076840 evm_27.TU.AmTr_v1... Rhodanese-like domain-containing protein 10... 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00014960 evm_27.TU.AmTr_v1... Rhodanese-like domain-containing protein 9,... 0.04 OrthoFinder output from all 47 species
AT2G42220 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G08920 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G24750 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.14 OrthoFinder output from all 47 species
Adi_g006285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0072.g036944 No alias not classified & original description: CDS=66-932 0.04 OrthoFinder output from all 47 species
Cba_g00604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G084300.1 Ceric.01G084300 not classified & original description: pacid=50591954... 0.02 OrthoFinder output from all 47 species
Ceric.12G060800.1 Ceric.12G060800 not classified & original description: pacid=50601365... 0.1 OrthoFinder output from all 47 species
Cre13.g602650 No alias Rhodanese-like domain-containing protein 11,... 0.05 OrthoFinder output from all 47 species
Dcu_g09710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10468 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g31833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011156001 No alias Rhodanese-like domain-containing protein 10... 0.07 OrthoFinder output from all 47 species
GSVIVT01033526001 No alias Rhodanese-like domain-containing protein 9,... 0.03 OrthoFinder output from all 47 species
Len_g22829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436404g0010 No alias Rhodanese-like domain-containing protein 9,... 0.03 OrthoFinder output from all 47 species
Mp1g07610.1 No alias Rhodanese-like domain-containing protein 9,... 0.07 OrthoFinder output from all 47 species
Mp1g26470.1 No alias Rhodanese-like domain-containing protein 10... 0.04 OrthoFinder output from all 47 species
Mp2g14910.1 No alias Rhodanese-like domain-containing protein 11,... 0.05 OrthoFinder output from all 47 species
Msp_g01440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g25961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05630 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g19312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56335 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g13382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo103249 No alias Rhodanese-like domain-containing protein 9,... 0.05 OrthoFinder output from all 47 species
Solyc01g058220.3.1 Solyc01g058220 Rhodanese-like domain-containing protein 11,... 0.01 OrthoFinder output from all 47 species
Solyc03g053110.3.1 Solyc03g053110 Rhodanese-like domain-containing protein 9,... 0.08 OrthoFinder output from all 47 species
Solyc10g076700.2.1 Solyc10g076700 Rhodanese-like domain-containing protein 10... 0.11 OrthoFinder output from all 47 species
Solyc12g021340.3.1 Solyc12g021340 Rhodanese-like domain-containing protein 11,... 0.06 OrthoFinder output from all 47 species
Spa_g03291 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g09762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22029 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001311_P002 Zm00001e001311 Rhodanese-like domain-containing protein 10... 0.03 OrthoFinder output from all 47 species
Zm00001e015015_P001 Zm00001e015015 Rhodanese-like domain-containing protein 11,... 0.09 OrthoFinder output from all 47 species
Zm00001e033637_P001 Zm00001e033637 Rhodanese-like domain-containing protein 9,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 52 173
No external refs found!