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  5. LOC_Os03g11140.1

LOC_Os03g11140.1 (REN1, LOC_Os03g11140)


Aliases : REN1, LOC_Os03g11140

Description : Rho GTPase-activating protein 7 OS=Arabidopsis thaliana (sp|q8rwq4|rgap7_arath : 442.0)


Gene families : OG0001811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g11140.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT4G24580 REN1 Rho GTPase activation protein (RhoGAP) with PH domain 0.07 OrthoFinder output from all 47 species
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.03 OrthoFinder output from all 47 species
Adi_g057671 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70602 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023819 No alias ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09456 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01869 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01978 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009150001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01009151001 REN1 Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g24180.1 LOC_Os03g24180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os07g46450.1 LOC_Os07g46450 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Nbi_g03788 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26229 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo442380 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Tin_g19281 No alias ROP-activaTing protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001096_P001 REN1, Zm00001e001096 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e001710_P001 Zm00001e001710 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036715_P004 REN1, Zm00001e036715 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 587 667
IPR000198 RhoGAP_dom 209 352
IPR001849 PH_domain 54 157
No external refs found!