LOC_Os03g10180.1 (JAC1, LOC_Os03g10180)


Aliases : JAC1, LOC_Os03g10180

Description : actin filament reorganisation factor (JAC1). clathrin uncoating protein (AUL)


Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10180.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00139560 JAC1,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AT1G75100 JAC1 J-domain protein required for chloroplast accumulation response 1 0.09 OrthoFinder output from all 47 species
Adi_g109494 No alias clathrin uncoating protein *(AUL) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07157 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13965 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08470 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17543 No alias clathrin uncoating protein *(AUL) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50602.t1 Aspi01Gene50602 clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52094.t1 Aspi01Gene52094 clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52095.t2 Aspi01Gene52095 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64854.t1 Aspi01Gene64854 clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25925 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G078100.1 Ceric.03G078100 clathrin uncoating protein *(AUL) & original... 0.11 OrthoFinder output from all 47 species
Dac_g16681 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07965 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26361 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02857 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009663001 JAC1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Lfl_g35886 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14948 No alias clathrin uncoating protein *(AUL) & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g39833 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59853 No alias clathrin uncoating protein *(AUL) & original description: none 0.06 OrthoFinder output from all 47 species
Smo447002 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Solyc04g080040.3.1 JAC1, Solyc04g080040 actin filament reorganisation factor (JAC1). clathrin... 0.04 OrthoFinder output from all 47 species
Zm00001e038789_P003 JAC1, Zm00001e038789 actin filament reorganisation factor (JAC1). clathrin... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!