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  5. LOC_Os03g08450.1

LOC_Os03g08450.1 (ATTIF3K1, TIF3K1,...)


Aliases : ATTIF3K1, TIF3K1, EIF3K, LOC_Os03g08450

Description : component eIF3k of eIF3 mRNA-to-PIC binding complex


Gene families : OG0007456 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08450.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00025830 ATTIF3K1,... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Aop_g01980 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010032 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g01603 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.23G074700.1 ATTIF3K1,... component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Cre12.g515650 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Dcu_g05261 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g00705 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01015014001 ATTIF3K1, TIF3K1, EIF3K Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Gb_13240 ATTIF3K1, TIF3K1, EIF3K component eIF3k of eIF3 mRNA-to-PIC binding complex 0.07 OrthoFinder output from all 47 species
MA_724630g0010 ATTIF3K1, TIF3K1, EIF3K component eIF3k of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Mp5g18860.1 ATTIF3K1, TIF3K1, EIF3K component eIF3k of eIF3 mRNA-to-PIC binding complex 0.12 OrthoFinder output from all 47 species
Msp_g45325 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g00659 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Pir_g00377 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009926 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Sam_g13929 No alias component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.1 OrthoFinder output from all 47 species
Smo154794 ATTIF3K1, TIF3K1, EIF3K Protein biosynthesis.translation... 0.06 OrthoFinder output from all 47 species
Solyc07g042570.3.1 ATTIF3K1,... component eIF3k of eIF3 mRNA-to-PIC binding complex 0.11 OrthoFinder output from all 47 species
Spa_g40914 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Tin_g23433 ATTIF3K1, TIF3K1, EIF3K component *(eIF3k) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e000607_P001 ATTIF3K1,... component eIF3k of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Zm00001e038858_P001 ATTIF3K1,... component eIF3k of eIF3 mRNA-to-PIC binding complex 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR033464 CSN8_PSD8_EIF3K 62 187
No external refs found!