LOC_Os03g08090.2 (LOC_Os03g08090)


Aliases : LOC_Os03g08090

Description : no hits & (original description: none)


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08090.2

Target Alias Description ECC score Gene Family Method Actions
AT1G72620 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g007050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0075.g037625 No alias not classified & original description: CDS=84-1271 0.04 OrthoFinder output from all 47 species
Ceric.13G021400.1 Ceric.13G021400 not classified & original description: pacid=50636343... 0.03 OrthoFinder output from all 47 species
Dde_g31443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002221001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01031980001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01038796001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g44960.1 LOC_Os01g44960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g42994.1 LOC_Os07g42994 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_119803g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_187078g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3552g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g17800.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g21870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g44726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015594_P002 Zm00001e015594 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020374_P001 Zm00001e020374 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025866_P002 Zm00001e025866 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 55 178
No external refs found!