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  5. LOC_Os03g06080.1

LOC_Os03g06080.1 (HIPP27, LOC_Os03g06080)


Aliases : HIPP27, LOC_Os03g06080

Description : Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana (sp|q67zw1|hip27_arath : 120.0)


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06080.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00210890 evm_27.TU.AmTr_v1... Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00251970 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G05365 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G66110 HIPP27 Heavy metal transport/detoxification superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g043934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34906 CCH copper chaperone *(ATX/CCH) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38643 HIPP20 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g40949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08784.t1 Aspi01Gene08784 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16665.t1 Aspi01Gene16665 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19665.t1 Aspi01Gene19665 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene19666.t1 Aspi01Gene19666 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene39647.t1 Aspi01Gene39647 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50654.t1 Aspi01Gene50654 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53126.t1 Aspi01Gene53126 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58084.t1 Aspi01Gene58084 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G056700.1 Ceric.15G056700 not classified & original description: pacid=50640002... 0.05 OrthoFinder output from all 47 species
Dcu_g12983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018723001 HIPP27 Heavy metal-associated isoprenylated plant protein 27... 0.05 OrthoFinder output from all 47 species
GSVIVT01018725001 HIPP27 Heavy metal-associated isoprenylated plant protein 27... 0.05 OrthoFinder output from all 47 species
GSVIVT01021208001 No alias Heavy metal-associated isoprenylated plant protein 28... 0.04 OrthoFinder output from all 47 species
Gb_05090 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_20917 HIPP20 Heavy metal-associated isoprenylated plant protein 20... 0.11 OrthoFinder output from all 47 species
Gb_21296 No alias Heavy metal-associated isoprenylated plant protein 30... 0.04 OrthoFinder output from all 47 species
LOC_Os08g31340.1 LOC_Os08g31340 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Lfl_g17429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_165810g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_175196g0010 No alias Heavy metal-associated isoprenylated plant protein 45... 0.03 OrthoFinder output from all 47 species
MA_525649g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g26500.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g04087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011436 No alias not classified & original description: CDS=202-840 0.03 OrthoFinder output from all 47 species
Solyc02g083550.2.1 HIPP26, FP6,... Heavy metal-associated isoprenylated plant protein 26... 0.06 OrthoFinder output from all 47 species
Solyc03g025790.4.1 Solyc03g025790 Heavy metal-associated isoprenylated plant protein 31... 0.03 OrthoFinder output from all 47 species
Solyc11g073020.3.1 Solyc11g073020 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g02349 ATX1, ATATX1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000435_P001 HIPP27, Zm00001e000435 Heavy metal-associated isoprenylated plant protein 27... 0.1 OrthoFinder output from all 47 species
Zm00001e029729_P001 Zm00001e029729 Heavy metal-associated isoprenylated plant protein 36... 0.03 OrthoFinder output from all 47 species
Zm00001e033958_P001 Zm00001e033958 Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 31 87
No external refs found!