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  5. LOC_Os03g05812.1

LOC_Os03g05812.1 (LOC_Os03g05812)


Aliases : LOC_Os03g05812

Description : no hits & (original description: none)


Gene families : OG0006244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g05812.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT3G17900 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.14 OrthoFinder output from all 47 species
Ala_g04455 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.02 OrthoFinder output from all 47 species
Aop_g08514 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.03 OrthoFinder output from all 47 species
Cba_g27477 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.04 OrthoFinder output from all 47 species
Ceric.39G030300.1 Ceric.39G030300 plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.1 OrthoFinder output from all 47 species
Dac_g01023 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.02 OrthoFinder output from all 47 species
Ehy_g23180 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.03 OrthoFinder output from all 47 species
GSVIVT01020074001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036940001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_40358 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g30924 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.05 OrthoFinder output from all 47 species
Lfl_g40725 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.13 OrthoFinder output from all 47 species
Mp3g24570.1 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Msp_g09162 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.07 OrthoFinder output from all 47 species
Ore_g30553 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.02 OrthoFinder output from all 47 species
Pir_g20103 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.02 OrthoFinder output from all 47 species
Ppi_g52295 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.04 OrthoFinder output from all 47 species
Solyc05g007030.4.1 Solyc05g007030 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Spa_g07157 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.03 OrthoFinder output from all 47 species
Zm00001e039644_P001 Zm00001e039644 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!