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  5. LOC_Os03g05460.1

LOC_Os03g05460.1 (LOC_Os03g05460)


Aliases : LOC_Os03g05460

Description : no hits & (original description: none)


Gene families : OG0010713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g05460.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Ehy_g08315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g63310.1 LOC_Os01g63310 no description available(sp|q9lfb9|opsl1_arath : 112.0) 0.04 OrthoFinder output from all 47 species
Solyc10g085070.3.1 Solyc10g085070 no description available(sp|q9ss80|ops_arath : 275.0) 0.03 OrthoFinder output from all 47 species
Zm00001e038979_P001 Zm00001e038979 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR008004 OCTOPUS-like 35 65
IPR008004 OCTOPUS-like 296 424
No external refs found!