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  5. LOC_Os03g03200.1

LOC_Os03g03200.1 (LOC_Os03g03200)


Aliases : LOC_Os03g03200

Description : no hits & (original description: none)


Gene families : OG0002957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g03200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00264010 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G52750 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G80280 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G40095 No alias Alpha/beta hydrolase related protein 0.03 OrthoFinder output from all 47 species
Adi_g006381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g022717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13054.t1 IMK2, Aspi01Gene13054 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25033.t1 Aspi01Gene25033 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0319.g064420 No alias not classified & original description: CDS=1-231 0.03 OrthoFinder output from all 47 species
Ceric.25G069600.1 Ceric.25G069600 not classified & original description: pacid=50593946... 0.05 OrthoFinder output from all 47 species
Dde_g01401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017215001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032833001 SUE4 No description available 0.1 OrthoFinder output from all 47 species
Gb_28413 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g15932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12476g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g16044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18724 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015993 No alias not classified & original description: CDS=686-1396 0.03 OrthoFinder output from all 47 species
Smo106067 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc05g052750.3.1 Solyc05g052750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g04519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000176_P001 Zm00001e000176 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e002208_P001 SUE4, Zm00001e002208 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e038090_P001 Zm00001e038090 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!