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  5. LOC_Os02g57510.2

LOC_Os02g57510.2 (ATBS14A, BET11,...)


Aliases : ATBS14A, BET11, ATBET11, BS14A, LOC_Os02g57510

Description : Bs14 group Qc-type SNARE protein


Gene families : OG0002346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g57510.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00222950 ATBS14A, BET11,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT3G58170 ATBS14A, BET11,... BET1P/SFT1P-like protein 14A 0.03 OrthoFinder output from all 47 species
Ceric.15G058500.1 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g18980 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ehy_g18981 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Len_g57970 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pnu_g17119 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ppi_g49759 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Solyc06g008520.4.1 ATBS14A, BET11,... Bs14 group Qc-type SNARE protein 0.05 OrthoFinder output from all 47 species
Spa_g08535 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Tin_g07692 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Tin_g09671 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e003875_P001 ATBS14A, BET11,... Bs14 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!