LOC_Os02g55340.1 (LOC_Os02g55340)


Aliases : LOC_Os02g55340

Description : protein kinase (VPS15). regulatory component VPS15 of PI3-kinase vesicle nucleation complex I/II


Gene families : OG0004133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004133_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g55340.1

Target Alias Description ECC score Gene Family Method Actions
AT4G29380 No alias protein kinase family protein / WD-40 repeat family protein 0.04 OrthoFinder output from all 47 species
Ala_g25267 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Als_g01982 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aop_g13770 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cba_g05340 No alias EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Ceric.01G130700.1 Ceric.01G130700 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cre06.g290500 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.04 OrthoFinder output from all 47 species
GSVIVT01015287001 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.05 OrthoFinder output from all 47 species
Gb_24425 No alias protein kinase (VPS15). regulatory component VPS15 of... 0.02 OrthoFinder output from all 47 species
Gb_24427 No alias protein kinase (VPS15). regulatory component VPS15 of... 0.03 OrthoFinder output from all 47 species
Lfl_g36617 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ore_g15145 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Pir_g17796 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005619 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g11623 No alias EC_2.7 transferase transferring phosphorus-containing... 0.07 OrthoFinder output from all 47 species
Sam_g37825 No alias regulatory kinase component *(VPS15) of PI3-kinase... 0.02 OrthoFinder output from all 47 species
Solyc04g012170.4.1 Solyc04g012170 protein kinase (VPS15). regulatory component VPS15 of... 0.04 OrthoFinder output from all 47 species
Zm00001e016126_P001 Zm00001e016126 protein kinase (VPS15). regulatory component VPS15 of... 0.05 OrthoFinder output from all 47 species
Zm00001e023688_P001 Zm00001e023688 protein kinase (VPS15). regulatory component VPS15 of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1074 1110
IPR000719 Prot_kinase_dom 71 332
IPR000357 HEAT 580 605
No external refs found!