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  5. LOC_Os02g54090.1

LOC_Os02g54090.1 (LOC_Os02g54090)


Aliases : LOC_Os02g54090

Description : no hits & (original description: none)


Gene families : OG0002011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54090.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Adi_g059748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G069500.1 Ceric.11G069500 not classified & original description: pacid=50596089... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.11 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g08526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027307_P001 Zm00001e027307 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!