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  5. LOC_Os02g52150.1

LOC_Os02g52150.1 (LOC_Os02g52150)


Aliases : LOC_Os02g52150

Description : class-M-I small heat-shock-responsive protein


Gene families : OG0000788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g52150.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00091290 HSP21,... Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
AMTR_s00078p00048310 evm_27.TU.AmTr_v1... 26.5 kDa heat shock protein, mitochondrial... 0.03 OrthoFinder output from all 47 species
AMTR_s00113p00022880 HSP21,... Small heat shock protein, chloroplastic OS=Petunia hybrida 0.05 OrthoFinder output from all 47 species
AT1G52560 No alias HSP20-like chaperones superfamily protein 0.17 OrthoFinder output from all 47 species
AT4G25200 ATHSP23.6-MITO,... mitochondrion-localized small heat shock protein 23.6 0.14 OrthoFinder output from all 47 species
AT4G27670 HSP21 heat shock protein 21 0.12 OrthoFinder output from all 47 species
AT5G51440 No alias HSP20-like chaperones superfamily protein 0.17 OrthoFinder output from all 47 species
Aev_g10929 HSP21 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aev_g20013 HSP21 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g20014 HSP21 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g44644 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09601 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46344 HSP21 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g54569 HSP21 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03928 HSP21 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g04821 HSP21 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20654 HSP21 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene59169.t1 HSP21, Aspi01Gene59169 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007781 HSP21 not classified & original description: CDS=90-1001 0.02 OrthoFinder output from all 47 species
Cba_g01707 HSP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02328 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G109000.1 HSP21, Ceric.02G109000 not classified & original description: pacid=50584433... 0.04 OrthoFinder output from all 47 species
Ceric.24G036200.1 HSP21, Ceric.24G036200 not classified & original description: pacid=50628617... 0.04 OrthoFinder output from all 47 species
Ceric.36G020500.1 Ceric.36G020500 not classified & original description: pacid=50568326... 0.03 OrthoFinder output from all 47 species
Dac_g06865 HSP21 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g31767 HSP21 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g44641 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g00718 HSP21 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g36861 HSP21 not classified & original description: none 0.15 OrthoFinder output from all 47 species
Dde_g00269 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12754 HSP21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08224 HSP21 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g08370 HSP21 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g10284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12352 HSP21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001315001 ATHSP23.6-MITO,... External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
GSVIVT01001316001 ATHSP23.6-MITO,... External stimuli response.temperature.Hsp... 0.08 OrthoFinder output from all 47 species
GSVIVT01010308001 HSP21 Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01017322001 No alias External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
GSVIVT01018654001 ATHSP23.6-MITO,... External stimuli response.temperature.Hsp... 0.08 OrthoFinder output from all 47 species
GSVIVT01038631001 HSP21 External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
Gb_01039 No alias Small heat shock protein, chloroplastic OS=Oxybasis... 0.1 OrthoFinder output from all 47 species
Gb_01394 No alias class-M-I small heat-shock-responsive protein 0.1 OrthoFinder output from all 47 species
Gb_13755 HSP21 Heat shock protein 21, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_17729 ATHSP23.6-MITO,... class-M-I small heat-shock-responsive protein 0.04 OrthoFinder output from all 47 species
Gb_31887 HSP21 class-M-II small heat-shock-responsive protein 0.06 OrthoFinder output from all 47 species
Len_g28316 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51304 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00516 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13917 HSP21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33048 HSP21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_3081g0010 No alias class-M-I small heat-shock-responsive protein 0.04 OrthoFinder output from all 47 species
MA_605776g0010 HSP21 Small heat shock protein, chloroplastic OS=Petunia... 0.06 OrthoFinder output from all 47 species
Mp6g19170.1 HSP21 Small heat shock protein, chloroplastic OS=Petunia... 0.03 OrthoFinder output from all 47 species
Mp6g20700.1 HSP21 Heat shock protein 21, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g05080 HSP21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11798 HSP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08564 HSP21 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11739 ATHSP23.6-MITO,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12385 HSP21 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g18827 HSP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02972 HSP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04884 HSP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05039 HSP21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37994 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42086 HSP21 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g42087 HSP21 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g07234 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06763 HSP21 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017235 HSP21 not classified & original description: CDS=1-699 0.04 OrthoFinder output from all 47 species
Smo27623 HSP21 Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Smo405022 HSP21 Small heat shock protein, chloroplastic OS=Solanum lycopersicum 0.11 OrthoFinder output from all 47 species
Smo79678 HSP21 Small heat shock protein, chloroplastic OS=Triticum aestivum 0.11 OrthoFinder output from all 47 species
Solyc03g082420.3.1 HSP21, Solyc03g082420 class-P small heat-shock-responsive protein 0.14 OrthoFinder output from all 47 species
Solyc05g014280.4.1 HSP21, Solyc05g014280 Small heat shock protein, chloroplastic OS=Pisum sativum... 0.11 OrthoFinder output from all 47 species
Solyc12g042830.3.1 Solyc12g042830 26.5 kDa heat shock protein, mitochondrial... 0.05 OrthoFinder output from all 47 species
Spa_g00891 HSP21 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g11047 HSP21 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g11048 HSP21 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g11644 HSP21 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g11645 HSP21 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g12556 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g14297 HSP21 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g19800 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g22826 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24920 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g10814 HSP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37680 HSP21 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g45236 HSP21 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e001024_P001 HSP21, Zm00001e001024 class-P small heat-shock-responsive protein 0.18 OrthoFinder output from all 47 species
Zm00001e003449_P001 HSP21, Zm00001e003449 Small heat shock protein, chloroplastic OS=Pisum sativum... 0.19 OrthoFinder output from all 47 species
Zm00001e014025_P001 Zm00001e014025 23.6 kDa heat shock protein, mitochondrial OS=Oryza... 0.04 OrthoFinder output from all 47 species
Zm00001e023840_P003 Zm00001e023840 class-M-I small heat-shock-responsive protein 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 124 220
No external refs found!