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  5. LOC_Os02g48640.1

LOC_Os02g48640.1 (LOC_Os02g48640)


Aliases : LOC_Os02g48640

Description : no hits & (original description: none)


Gene families : OG0002225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g48640.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00226500 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G12070 No alias unknown protein; INVOLVED IN: biological_process... 0.08 OrthoFinder output from all 47 species
Aev_g18542 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g00957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013138 No alias not classified & original description: CDS=1-1665 0.03 OrthoFinder output from all 47 species
Azfi_s0485.g073399 No alias not classified & original description: CDS=327-1682 0.03 OrthoFinder output from all 47 species
Cba_g12140 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025315001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_32639 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g29509 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g13811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07849 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08971 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g28597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g056620.3.1 Solyc11g056620 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e015656_P001 Zm00001e015656 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!