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  5. LOC_Os02g46510.1

LOC_Os02g46510.1 (LOC_Os02g46510)


Aliases : LOC_Os02g46510

Description : medium subunit mu of AP-2 cargo adaptor complex


Gene families : OG0004664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g46510.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT5G46630 No alias Clathrin adaptor complexes medium subunit family protein 0.03 OrthoFinder output from all 47 species
Ala_g05592 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene52597.t1 Aspi01Gene52597 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G048100.1 Ceric.39G048100 medium subunit mu of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Cre16.g685277 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Dcu_g06246 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.1 OrthoFinder output from all 47 species
GSVIVT01013199001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.11 OrthoFinder output from all 47 species
Len_g09704 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g03948 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
MA_18178g0010 No alias medium subunit mu of AP-2 cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Mp1g27000.1 No alias medium subunit mu of AP-2 cargo adaptor complex 0.02 OrthoFinder output from all 47 species
Msp_g11541 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.06 OrthoFinder output from all 47 species
Msp_g43302 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g02910 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.07 OrthoFinder output from all 47 species
Ore_g40720 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Pp3c27_2250V3.1 Pp3c27_2250 Clathrin adaptor complexes medium subunit family protein 0.01 OrthoFinder output from all 47 species
Ppi_g03125 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Sam_g08727 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Smo173172 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Solyc06g061150.3.1 Solyc06g061150 medium subunit mu of AP-2 cargo adaptor complex 0.06 OrthoFinder output from all 47 species
Solyc08g006960.3.1 Solyc08g006960 medium subunit mu of AP-2 cargo adaptor complex 0.14 OrthoFinder output from all 47 species
Spa_g12519 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e015492_P001 Zm00001e015492 medium subunit mu of AP-2 cargo adaptor complex 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 167 438
No external refs found!