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Aliases : SRCAP, PIE1, chr13, LOC_Os02g46450
Description : ATPase component PIE1 of SWR1 chromatin remodeling complex
Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00085p00089520 | SRCAP, PIE1,... | Chromatin organisation.chromatin remodeling... | 0.08 | OrthoFinder output from all 47 species | |
| AT3G12810 | SRCAP, PIE1, chr13 | SNF2 domain-containing protein / helicase... | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g086891 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g17049 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20021 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g21115 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g04504 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g11978 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13991 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g12343 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G011100.1 | SRCAP, PIE1,... | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000194.25 | SRCAP, PIE1, chr13 | Chromatin organisation.chromatin remodeling... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000194.26 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.02 | OrthoFinder output from all 47 species | |
| Cre14.g618860 | SRCAP, PIE1, chr13 | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12650 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08326 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g22840 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01033511001 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.13 | OrthoFinder output from all 47 species | |
| Gb_04358 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30810 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
| MA_424432g0010 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.09 | OrthoFinder output from all 47 species | |
| MA_64269g0010 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.06 | OrthoFinder output from all 47 species | |
| MA_9456975g0010 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.06 | OrthoFinder output from all 47 species | |
| Mp7g15670.1 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15065 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13998 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g22822 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11854 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56964 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g11626 | No alias | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g063210.3.1 | SRCAP, PIE1,... | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g063220.2.1 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.15 | OrthoFinder output from all 47 species | |
| Spa_g09110 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g46640 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015483_P001 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e023267_P001 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.15 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001650 | Helicase_C | 99 | 207 |
| No external refs found! |