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  5. LOC_Os02g43840.1

LOC_Os02g43840.1 (LOC_Os02g43840)


Aliases : LOC_Os02g43840

Description : peptidase (PPPDE)


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g43840.1

Target Alias Description ECC score Gene Family Method Actions
AT1G47740 No alias PPPDE putative thiol peptidase family protein 0.03 OrthoFinder output from all 47 species
Adi_g059581 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09173 No alias deubiquitinase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01518 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0041.g026790 No alias deubiquitinase & original description: CDS=431-1120 0.03 OrthoFinder output from all 47 species
Azfi_s0139.g051213 No alias deubiquitinase & original description: CDS=368-799 0.01 OrthoFinder output from all 47 species
Ehy_g15889 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g08360.1 LOC_Os06g08360 peptidase (PPPDE) 0.01 OrthoFinder output from all 47 species
Len_g09883 No alias deubiquitinase & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g25771 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00987 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07876 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Smo68072 No alias Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Spa_g08954 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56256 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08167 No alias deubiquiTinase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000776_P001 Zm00001e000776 peptidase (PPPDE) 0.05 OrthoFinder output from all 47 species
Zm00001e015316_P001 Zm00001e015316 peptidase (PPPDE) 0.05 OrthoFinder output from all 47 species
Zm00001e038787_P002 Zm00001e038787 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 11 145
No external refs found!