LOC_Os02g42440.1 (LOC_Os02g42440)


Aliases : LOC_Os02g42440

Description : Putative GEM-like protein 8 OS=Arabidopsis thaliana (sp|q9fmw4|geml8_arath : 193.0)


Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42440.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G28200 FIP1 FH interacting protein 1 0.03 OrthoFinder output from all 47 species
AT5G13200 No alias GRAM domain family protein 0.03 OrthoFinder output from all 47 species
AT5G23370 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 OrthoFinder output from all 47 species
Adi_g000554 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116978 FIP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12173 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36046 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13339.t1 Aspi01Gene13339 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13339.t2 Aspi01Gene13339 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52647.t1 FIP1, Aspi01Gene52647 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60753.t1 FIP1, Aspi01Gene60753 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26381 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11079 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48555 GEM not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01019136001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08860.1 FIP1, LOC_Os03g08860 GEM-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g29120.1 GEM, LOC_Os09g29120 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g08110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23716 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g45212 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06428 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10255128g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g05605 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35377 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00396 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38114 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009760.3.1 Solyc01g009760 GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g098660.3.1 Solyc03g098660 GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g011590.2.1 Solyc11g011590 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g05449 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20230 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22675 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007528_P001 Zm00001e007528 GEM-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012085_P001 FIP1, Zm00001e012085 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e015212_P001 Zm00001e015212 GEM-like protein 6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e023068_P001 Zm00001e023068 GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039556_P001 Zm00001e039556 GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e041280_P002 Zm00001e041280 GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 110 229
No external refs found!