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  5. LOC_Os02g36710.1

LOC_Os02g36710.1 (NRP2, LOC_Os02g36710)


Aliases : NRP2, LOC_Os02g36710

Description : histone chaperone (NRP)


Gene families : OG0001637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g36710.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G18800 NRP2 NAP1-related protein 2 0.09 OrthoFinder output from all 47 species
Adi_g115165 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21576.t1 NRP2, Aspi01Gene21576 histone chaperone *(NRP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31912.t1 NRP2, Aspi01Gene31912 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G055400.1 NRP2, Ceric.15G055400 histone chaperone *(NRP) & original description:... 0.02 OrthoFinder output from all 47 species
Cre06.g307600 NRP2 NAP1-related protein 2 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
GSVIVT01008022001 NRP2 NAP1-related protein 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011390001 NRP2 NAP1-related protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_17405 NRP2 histone chaperone (NRP) 0.02 OrthoFinder output from all 47 species
Gb_36879 NRP2 histone chaperone (NRP) 0.03 OrthoFinder output from all 47 species
Len_g59471 NRP2 histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427220g0020 NRP2 histone chaperone (NRP) 0.04 OrthoFinder output from all 47 species
MA_25056g0010 NRP2 histone chaperone (NRP) 0.04 OrthoFinder output from all 47 species
Mp3g22840.1 NRP2 histone chaperone (NRP) 0.03 OrthoFinder output from all 47 species
Sam_g18417 No alias histone chaperone *(NRP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo89449 NRP2 NAP1-related protein 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g116170.3.1 NRP2, Solyc03g116170 histone chaperone (NRP) 0.03 OrthoFinder output from all 47 species
Solyc06g069890.4.1 NRP2, Solyc06g069890 histone chaperone (NRP) 0.03 OrthoFinder output from all 47 species
Spa_g11282 NRP2 histone chaperone *(NRP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05423 NRP2 histone chaperone *(NRP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022803_P001 NRP2, Zm00001e022803 histone chaperone (NRP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002164 NAP_family 78 225
No external refs found!