LOC_Os02g29340.1 (AT-HSFA5, HSFA5,...)

Aliases : AT-HSFA5, HSFA5, LOC_Os02g29340

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g29340.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00048p00075850	HSFA1B, ATHSF3,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
Aop_g08806	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene00093.t1	HSFB4, SCZ,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0062.g035157	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0092.g043011	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0116.g046398	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-1350	0.03	OrthoFinder output from all 47 species
Dde_g31695	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01021269001	HSF A4A, AT-HSFA4A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
Mp4g12230.1	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Ore_g32244	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.05	OrthoFinder output from all 47 species
Solyc03g006000.3.1	HSF A4A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc08g076590.3.1	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	OrthoFinder output from all 47 species
Spa_g17508	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e005982_P001	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e014583_P001	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	22	112

External Links

No external refs found!

LOC_Os02g29340.1 (AT-HSFA5, HSFA5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation