- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os02g21925
Description : no hits & (original description: none)
Gene families : OG0001149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001149_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00064960 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00130p00015630 | evm_27.TU.AmTr_v1... | No description available | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00130p00053590 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT2G27830 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G22758 | No alias | unknown protein; LOCATED IN: chloroplast; BEST... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G37730 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g38223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g39187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g45689 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28123 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g25626 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22653 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G015100.1 | Ceric.12G015100 | not classified & original description: pacid=50601856... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03574 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g45960 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21972 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03133 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g18777 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011711001 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Gb_07712 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_23758 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g32580.1 | LOC_Os02g32580 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g03660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g15560.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g25743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g46518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g66707 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g07628 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015542 | No alias | not classified & original description: CDS=322-663 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo18527 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g009430.3.1 | Solyc01g009430 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g091535.1.1 | Solyc02g091535 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g074620.3.1 | Solyc06g074620 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g079590.3.1 | Solyc08g079590 | Uncharacterized protein At4g22758 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g066860.2.1 | Solyc11g066860 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06711 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021224_P002 | Zm00001e021224 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | HCCA |
| CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| BP | GO:0006825 | copper ion transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0035434 | copper ion transmembrane transport | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |