LOC_Os02g13800.1 (AT-HSFC1, HSFC1,...)

Aliases : AT-HSFC1, HSFC1, LOC_Os02g13800

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g13800.1
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00132p00118400	HSF4, HSFB1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AMTR_s00176p00024870	HSFA1B, ATHSF3,...	Heat stress transcription factor A-1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
AMTR_s00176p00025440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AT2G26150	HSFA2, ATHSFA2	heat shock transcription factor A2	0.03	OrthoFinder output from all 47 species
AT3G51910	AT-HSFA7A, HSFA7A	heat shock transcription factor A7A	0.04	OrthoFinder output from all 47 species
AT3G63350	HSFA7B, AT-HSFA7B	winged-helix DNA-binding transcription factor family protein	0.04	OrthoFinder output from all 47 species
AT5G54070	AT-HSFA9, HSFA9	heat shock transcription factor A9	0.09	OrthoFinder output from all 47 species
Adi_g085653	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g115583	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12580	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g18442	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g23011	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g26655	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g78307	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.05G086000.1	ATHSF1, HSF1,...	HSF-type transcription factor & original description:...	0.08	OrthoFinder output from all 47 species
Dcu_g07589	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g00786	HSFA1E, ATHSFA1E	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g15070	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g20865	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g21083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g04765	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26513	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01003118001	AT-HSFA6B, HSFA6B	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01019829001	AT-HSFB2B, HSFB2B	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Gb_16343	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.01	OrthoFinder output from all 47 species
Gb_37236	HSF4, HSFB1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g53220.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
Nbi_g09948	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g18363	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g51248	AT-HSFC1, HSFC1	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g21944	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g30272	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02775	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08209	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g12599	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g48572	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g026020.3.1	AT-HSFB2A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Solyc04g016000.3.1	AT-HSFB3, HSFB3,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Solyc06g053950.3.1	AT-HSFA6B,...	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc07g040680.3.1	HSFA2, ATHSFA2,...	transcription factor (HSF)	0.13	OrthoFinder output from all 47 species
Spa_g28879	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g38102	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e000467_P001	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e014408_P001	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.13	OrthoFinder output from all 47 species
Zm00001e019898_P001	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.12	OrthoFinder output from all 47 species
Zm00001e032930_P002	AT-HSFA6B,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Zm00001e037165_P002	AT-HSFA7A,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	15	104

External Links

No external refs found!

LOC_Os02g13800.1 (AT-HSFC1, HSFC1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation