Aliases : MYBR1, MYB44, ATMYB44, ATMYBR1, LOC_Os02g09480
Description : transcription factor (MYB)
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00169630 | MYB73, ATMYB73,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
AT3G50060 | MYB77 | myb domain protein 77 | 0.04 | OrthoFinder output from all 47 species | |
AT4G33450 | ATMYB69, MYB69 | myb domain protein 69 | 0.04 | OrthoFinder output from all 47 species | |
AT4G37260 | MYB73, ATMYB73 | myb domain protein 73 | 0.04 | OrthoFinder output from all 47 species | |
AT5G67300 | MYBR1, MYB44,... | myb domain protein r1 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g047581 | MYB54, ATMYB54 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g081416 | ATMYB119, MYB119 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g109382 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g38609 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g39348 | MYB3R-1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g06590 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g12161 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g12163 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g14437 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g15763 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g27407 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g47836 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g08938 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene27436.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene45903.t1 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene49877.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene63694.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene66011.t1 | MYB77, Aspi01Gene66011 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0014.g013539 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0018.g014830 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0105.g044929 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0130.g049054 | MYB54, ATMYB54 | not classified & original description: CDS=1-720 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0163.g054240 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0179.g056258 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s1025.g095454 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: CDS=1-468 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g19865 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G075000.1 | MYB56, AtMYB56,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.23G045000.1 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G066200.1 | AtMYB117, LOF1,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g05787 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g10489 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g24773 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01000219001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009566001 | MYB70, AtMYB70 | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01020038001 | MYB88, AtMYB88 | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
Len_g56915 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g18053 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g28242 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g07801 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g11561 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g44400 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g30617 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g50854 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g65999 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g07324 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g08075 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g08134 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g12608 | ATMYB3R5, MYB3R-5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g24579 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g24702 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g27096 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g08219 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g12915 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0029.g010250 | ATMYB119, MYB119 | not classified & original description: CDS=1-2799 | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g092930.1.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g078420.1.1 | MYB73, ATMYB73,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g16126 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030480_P001 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e037510_P001 | MYBR1, MYB44,... | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
CC | GO:0018995 | host cellular component | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
CC | GO:0033643 | host cell part | IEP | HCCA |
CC | GO:0033646 | host intracellular part | IEP | HCCA |
CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
CC | GO:0042025 | host cell nucleus | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |