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  5. LOC_Os02g07070.1

LOC_Os02g07070.1 (SUA, LOC_Os02g07070)


Aliases : SUA, LOC_Os02g07070

Description : SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana (sp|f4jcu0|sua_arath : 514.0)


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g07070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00089100 SUA,... SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G54230 SUA suppressor of abi3-5 0.06 OrthoFinder output from all 47 species
Adi_g014405 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018709 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058381 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102062 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24331 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24332 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06676 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g37096 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g20905 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g22735 SUA not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g62492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63953 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19169 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04658 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21507.t1 SUA, Aspi01Gene21507 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34129.t1 SUA, Aspi01Gene34129 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038607 SUA not classified & original description: CDS=99-2927 0.04 OrthoFinder output from all 47 species
Cba_g31749 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G030500.1 SUA, Ceric.01G030500 not classified & original description: pacid=50592465... 0.1 OrthoFinder output from all 47 species
Ceric.22G052600.1 SUA, Ceric.22G052600 not classified & original description: pacid=50613886... 0.06 OrthoFinder output from all 47 species
Cre03.g184350 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g14899 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39059 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02935 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013204001 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
Len_g07229 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55563 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08592 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g29782 SUA not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Mp1g04870.1 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Ore_g07127 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10790 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20001 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41950 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49398 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16370 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g25177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38762 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo402018 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo407112 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Spa_g07600 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13781 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15554 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028204_P003 SUA, Zm00001e028204 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041591 OCRE 539 589
IPR000504 RRM_dom 242 301
IPR000504 RRM_dom 403 469
IPR000467 G_patch_dom 924 965
No external refs found!