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  5. LOC_Os01g71760.1

LOC_Os01g71760.1 (BAT1, LOC_Os01g71760)


Aliases : BAT1, LOC_Os01g71760

Description : gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71760.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00246830 BAT1,... Solute transport.carrier-mediated transport.APC... 0.07 OrthoFinder output from all 47 species
Aspi01Gene36293.t1 BAT1, Aspi01Gene36293 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48439.t1 BAT1, Aspi01Gene48439 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g71740.1 BAT1, LOC_Os01g71740 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Msp_g27472 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13339 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Pp3c4_15080V3.1 Pp3c4_15080 bidirectional amino acid transporter 1 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 34 477
No external refs found!