LOC_Os01g71280.1 (GPDHC1, LOC_Os01g71280)

Aliases : GPDHC1, LOC_Os01g71280

Description : NAD-dependent glycerol-3-phosphate dehydrogenase. NAD-dependent glycerol-3-phosphate dehydrogenase

Gene families : OG0002337 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002337_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g71280.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G41540	GPDHC1	6-phosphogluconate dehydrogenase family protein	0.07	OrthoFinder output from all 47 species
Ala_g01822	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.04	OrthoFinder output from all 47 species
Aop_g29961	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene50207.t1	GPDHC1, Aspi01Gene50207	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene62892.t1	GPDHC1, Aspi01Gene62892	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Ceric.37G016500.1	GPDHC1, Ceric.37G016500	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.04	OrthoFinder output from all 47 species
Dcu_g11543	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.05	OrthoFinder output from all 47 species
Dde_g02877	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Dde_g24089	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
GSVIVT01001463001	GPDHC1	Lipid metabolism.glycerolipid synthesis.phosphatidic...	0.05	OrthoFinder output from all 47 species
MA_15670g0010	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.02	OrthoFinder output from all 47 species
Pnu_g10286	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Ppi_g03808	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.05	OrthoFinder output from all 47 species
Ppi_g11581	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020181	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024917	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Solyc04g016330.3.1	GPDHC1, Solyc04g016330	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.04	OrthoFinder output from all 47 species
Spa_g18976	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.04	OrthoFinder output from all 47 species
Spa_g25786	GPDHC1	NAD-dependent glycerol-3-phosphate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Zm00001e018694_P002	GPDHC1, Zm00001e018694	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.03	OrthoFinder output from all 47 species
Zm00001e027346_P001	GPDHC1, Zm00001e027346	NAD-dependent glycerol-3-phosphate dehydrogenase....	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0006072	glycerol-3-phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEA	Interproscan
BP	GO:0046434	organophosphate catabolic process	None	Extended
MF	GO:0051287	NAD binding	IEA	Interproscan
BP	GO:0052646	alditol phosphate metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006109	G3P_DH_NAD-dep_C	268	416
IPR011128	G3P_DH_NAD-dep_N	140	243

External Links

No external refs found!

LOC_Os01g71280.1 (GPDHC1, LOC_Os01g71280)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation