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Aliases : LOC_Os01g68820
Description : no hits & (original description: none)
Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g68820.1 | |
| Cluster | HCCA: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00255370 | AFP3,... | RNA biosynthesis.transcriptional repression.AFP/NINJA... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G29575 | AFP3 | ABI five binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07969 | AFP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g14024 | NINJA | transcriptional co-repressor *(AFP/NINJA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g35216 | AFP3 | transcriptional co-repressor *(AFP/NINJA) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13840 | NINJA | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27252 | NINJA | transcriptional co-repressor *(AFP/NINJA) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03578 | NINJA | transcriptional co-repressor *(AFP/NINJA) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene37245.t1 | NINJA, Aspi01Gene37245 | transcriptional co-repressor *(AFP/NINJA) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34419 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01983 | AFP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g36399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07044 | AFP3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08137 | AFP4, TMAC2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008104001 | AFP3 | RNA biosynthesis.transcriptional repression.AFP/NINJA... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30226 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30382 | NINJA | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19056 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g32749 | NINJA | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02348 | AFP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001786 | NINJA | transcriptional co-repressor *(AFP/NINJA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g030620.1.1 | AFP3, Solyc02g030620 | transcriptional co-repressor (AFP/NINJA) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g030633.1.1 | AFP3, Solyc02g030633 | transcriptional co-repressor (AFP/NINJA) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g066855.1.1 | AFP3, Solyc02g066855 | transcriptional co-repressor (AFP/NINJA) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g066905.1.1 | AFP2, Solyc02g066905 | transcriptional co-repressor (AFP/NINJA) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g150115.1.1 | AFP2, Solyc02g150115 | transcriptional co-repressor (AFP/NINJA) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038719_P006 | AFP2, Zm00001e038719 | transcriptional co-repressor (AFP/NINJA) | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
| BP | GO:0030026 | cellular manganese ion homeostasis | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | HCCA |
| BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
| BP | GO:0055071 | manganese ion homeostasis | IEP | HCCA |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
| BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032308 | TDBD | 114 | 198 |
| No external refs found! |