Heatmap: Cluster_115 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g07930.1 (LOC_Os01g07930)
-2.66 -2.12 -1.23 -3.39 -4.07 -2.69 -1.91 -5.44 -5.76 2.27 5.41 - - -3.72 - - -6.12 -7.69 - - - - - - - -4.99 - - - - - - - - - - - - - - - - - -8.14 - - -5.19 -3.37 -
LOC_Os01g13180.1 (LOC_Os01g13180)
0.23 0.67 1.53 1.85 -1.57 -4.21 -0.17 -1.55 -2.6 2.21 4.61 - -3.75 -1.99 -0.45 - -0.34 -3.0 -0.75 -1.22 - - -8.04 - -0.36 -2.98 -2.8 - - -3.35 - -3.12 - - - - - - - -5.8 -6.06 - - -2.43 -1.34 -2.61 -0.06 -0.04 0.94
-3.25 -0.78 -6.01 -6.11 -9.06 -6.54 -1.9 -2.35 -1.56 0.54 2.61 -3.19 -0.46 0.78 -2.27 -1.61 -2.13 1.4 1.85 1.49 -2.46 -2.01 -3.28 -2.1 -0.58 -2.69 -1.43 -2.99 -3.33 -2.91 -3.26 -3.62 -2.91 -2.89 -2.41 -2.22 -2.28 -1.59 -2.05 -3.85 -4.32 -3.81 -3.55 2.44 -0.76 1.22 3.14 2.17 0.74
LOC_Os01g33650.1 (LOC_Os01g33650)
-4.05 1.95 - - -1.43 - 1.47 - -3.42 4.03 4.65 - - -2.33 - - - - - - - - - -4.74 - - - - - - - -3.43 - - - - - - - - - - - - - - - - -
0.44 2.0 0.79 -2.47 -3.03 -2.56 -1.16 -1.04 -1.25 3.1 4.47 - -0.92 0.32 - - 1.36 -7.26 1.48 -5.23 - -4.53 -4.95 -6.27 -0.08 -4.65 - - - -2.54 -2.81 -3.19 - - - - - - - - - - - -3.05 -2.6 -2.52 -2.25 - -
LOC_Os01g68820.1 (LOC_Os01g68820)
-6.28 -1.83 - -4.7 -4.1 - -3.58 -7.45 - 1.27 5.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -8.14 - - - - -
-0.15 1.15 2.21 -4.74 - -2.34 -5.74 -2.89 0.32 2.59 4.99 - -2.8 -2.6 - - -0.19 -5.33 - - - - - - - - - - - - - - - - - - - - - - - - - -5.6 -1.92 -3.76 - - -1.71
LOC_Os02g09270.1 (CYP71A25)
-0.8 -0.38 -3.57 - -3.48 - -0.43 -5.47 -4.11 4.19 4.77 -3.86 - -2.53 - - -6.11 -2.72 - -5.15 - -5.89 -7.95 -4.53 - - -3.71 - - - - -3.39 - -3.44 - - - - - -6.39 -4.81 -6.38 - -4.59 - -4.03 -2.96 - -2.66
2.79 1.55 -1.88 -3.47 -4.94 -4.79 -1.77 -1.25 -0.09 1.42 3.65 -5.83 -0.27 0.18 - -4.06 1.53 -0.54 0.42 -0.39 -1.85 -2.1 -1.92 -2.29 0.95 -0.05 -0.6 -1.17 -1.94 -2.08 -0.78 -1.25 -1.12 -2.77 -2.09 -2.44 -2.37 -1.58 -1.84 -2.18 -1.38 -1.46 -1.3 -2.0 -0.61 -1.61 -0.25 0.02 0.48
-12.95 -5.43 -9.09 -9.54 -6.74 -9.85 -10.19 - -8.33 2.42 5.45 - -11.37 -9.68 - - -12.47 -9.54 - -10.65 - - -13.85 -13.26 -8.85 -7.59 - - - - - - - - - - - - - - - - - -11.36 -10.28 -9.67 -8.85 - -
2.03 -1.44 1.81 -5.7 -6.95 -6.85 1.27 0.26 -5.62 1.84 3.54 -3.0 -7.37 -3.56 - - -3.3 -6.67 2.51 -5.13 - -7.63 - - -1.19 - - - - - - -5.63 - - - - - - - - -9.35 - - -0.13 1.13 1.8 0.97 -1.93 2.77
LOC_Os02g31210.1 (LOC_Os02g31210)
-0.86 2.02 - -2.98 -2.6 2.38 0.24 0.33 -2.22 2.46 3.32 -3.45 0.38 0.67 -0.12 -0.68 -2.01 1.57 - 0.73 -4.46 -6.91 -4.31 -4.57 1.22 1.13 -0.68 -2.83 - - -2.76 -3.75 - - - - - -1.64 - -6.72 - -4.52 -4.52 1.39 0.27 -0.86 -0.8 -1.83 -
LOC_Os02g33170.1 (LOC_Os02g33170)
-1.32 -1.33 -3.26 -4.48 -3.74 - 0.49 1.15 -1.46 0.22 5.4 - -2.88 -3.73 - - -5.19 -2.62 - -5.93 -6.53 -6.04 -5.29 - - - - - - - - - - - - - - - - - - - - -7.01 - - - - -
-7.83 -0.51 - -1.6 2.12 - -5.28 -3.69 - 2.49 5.2 - - -4.44 - - - -8.86 - - - - - - - - - - - - - - - - - - - - - - - - - - -1.27 -3.7 -0.99 - -
LOC_Os02g36680.1 (LOC_Os02g36680)
-10.59 -5.31 -6.12 -6.58 - -8.03 -5.75 -6.67 -4.54 4.43 4.77 -9.38 -6.57 -5.69 - - -8.63 -8.5 - -8.46 - - - - -6.05 -5.38 - - - - - -9.15 - - - - - - - - - - - -9.23 - - - - -
LOC_Os02g41490.1 (LOC_Os02g41490)
1.43 3.04 1.15 - - - 1.86 1.46 -0.23 -2.63 3.48 - -0.33 0.91 - - -1.99 2.04 - 0.18 -3.87 - -3.86 - 2.02 - -0.29 - - - - -2.08 - - - - - - - - - - - 1.66 -0.42 - - - -
LOC_Os02g43030.1 (LOC_Os02g43030)
-3.29 0.02 - - - - -3.87 -1.98 -0.66 1.5 5.0 -3.27 0.86 0.76 - - - 0.91 - -0.8 -1.89 -1.61 -1.63 -2.49 - - - - - -0.66 -0.92 -3.56 -1.4 - - -0.67 -1.73 - -1.13 -2.56 -2.14 -1.42 -0.41 - - - -1.04 - -
LOC_Os02g49140.1 (LOC_Os02g49140)
-0.24 0.84 -4.15 -5.84 2.39 -2.21 0.54 -0.04 1.61 2.45 3.38 -3.73 -0.01 0.67 -1.82 -1.12 -0.09 0.73 -0.56 -1.34 -3.3 -4.29 -3.49 -4.53 0.9 -2.25 -1.79 -3.38 -3.48 -3.39 -4.22 -4.68 -3.14 -5.4 -2.98 -2.94 -3.01 -3.36 -3.1 -5.02 -3.85 -4.74 -3.97 -0.71 -1.03 -0.72 1.61 1.05 0.69
LOC_Os03g18090.1 (LOC_Os03g18090)
0.39 1.87 - 0.32 - 2.29 2.3 1.0 - 2.78 3.22 - 0.59 -1.65 - - 2.5 -1.56 - -2.25 - - - - 1.35 - - - - - - - - - - - - - - - - - - -0.37 - - 1.38 -0.22 -
LOC_Os03g22470.1 (LOC_Os03g22470)
-4.1 -4.21 -4.31 -7.56 -8.58 -3.88 3.03 3.08 -6.41 4.06 3.92 -4.76 -8.94 -6.02 -5.83 - -7.74 -4.56 - -5.88 -7.37 -8.05 -7.59 -8.12 -6.66 - -6.5 - -6.37 -7.96 - -6.1 -5.9 - -6.03 -7.97 -7.83 -8.17 -8.12 -7.14 -6.75 -7.12 -6.05 -8.14 - -7.67 -6.32 -5.46 -6.53
1.18 -0.27 -0.66 -4.23 -2.02 - -1.55 - - 2.91 5.19 - - -3.7 - - -6.7 -3.82 - -2.65 -7.4 - - -6.57 - -2.55 -3.46 - - - - -3.17 - - - - - - - - - - - -6.25 - - - - -
LOC_Os04g16140.1 (LOC_Os04g16140)
-1.74 3.93 - -2.35 0.27 -0.82 -3.23 - 0.14 1.43 4.4 - - - - - -0.05 -0.98 - 2.03 -2.57 - - - - - - - - - - -0.92 - - - - - - - - - - - -2.45 - - - - -
LOC_Os04g29210.1 (LOC_Os04g29210)
2.17 1.36 1.35 - -3.62 - 0.1 -0.54 1.13 2.52 4.22 - 1.22 1.73 - -2.71 -2.53 -0.21 - -7.89 -4.25 -2.98 -2.89 -2.64 -2.56 - - - - -2.6 -2.93 - - - - - -3.73 - -4.03 -6.01 -7.76 - - -2.57 - -1.15 0.99 - -1.15
LOC_Os04g58070.1 (LOC_Os04g58070)
0.27 1.15 -4.36 -0.46 -3.26 0.68 2.14 1.98 0.26 1.31 2.56 -2.2 -1.64 -0.96 -1.99 -0.66 -0.39 -0.6 0.3 -0.57 -4.61 -6.13 -4.06 -4.88 -1.89 0.48 -0.48 - -2.84 -3.89 -4.05 -4.46 - - -2.8 -2.57 -4.22 - - -4.72 -3.39 -3.9 -2.96 0.42 0.92 1.69 3.12 -0.48 -0.94
-6.95 -3.61 -6.77 0.82 -0.7 -1.82 -2.02 -2.35 -5.58 2.99 5.22 -10.33 -8.81 -5.57 - - -6.83 -7.7 - -9.12 -12.45 -11.64 -12.06 - -6.46 -8.84 -6.27 - - - - - - - - - - - - - - - - -7.18 -5.74 -8.59 -1.56 -3.62 -
-4.23 -1.47 -0.76 3.68 0.59 -0.25 3.58 3.38 -8.67 1.58 2.84 -8.17 -5.02 -6.29 - - -9.53 -5.0 - -8.61 -8.15 -8.17 -10.12 -8.55 -5.43 -6.86 - - - - - -6.24 - - -6.64 - - - - - - - - -7.57 -6.33 -7.44 -4.82 - -
LOC_Os05g45520.1 (LOC_Os05g45520)
0.15 -0.69 -3.92 4.12 2.95 0.03 - -4.37 0.15 -3.34 3.31 - - 1.11 - - -7.24 -1.98 0.8 0.2 -8.32 -7.07 -6.08 -6.27 -0.76 0.96 0.74 - - - - -3.45 - - -3.72 - - - - -7.41 -6.78 - - -8.34 -4.35 -5.12 -3.52 - -
-2.42 -2.25 -6.23 - -6.9 -6.91 -2.32 -4.67 -3.13 3.78 5.1 - - -6.49 - - -6.66 -7.81 - -8.6 - - -9.02 -9.49 -3.92 - - - - - -6.39 - - - - - - - - - - - - - - - -5.31 -5.75 -
LOC_Os06g02460.1 (LOC_Os06g02460)
-7.96 -4.45 -7.4 -5.77 -4.68 - -2.3 -4.54 -6.21 3.2 5.3 - - - - - - -8.34 - -9.71 - - - - - -5.73 - - - - - - - - - - - - - - - - - -8.74 - - - - -
LOC_Os06g04169.1 (LOC_Os06g04169)
-3.52 0.88 -4.53 - - -9.28 1.22 1.16 1.41 0.99 3.26 -1.6 2.04 2.57 - -6.81 -2.98 2.48 -3.1 -3.63 -1.88 -1.71 -1.82 -1.83 2.79 - -7.14 -1.53 -2.13 -1.71 -1.7 -1.82 -2.35 -4.14 -2.65 -1.67 -1.79 -1.79 -1.96 -9.84 -8.59 -10.58 -8.87 -2.03 -2.08 -1.74 -3.38 - -
LOC_Os06g42990.1 (LOC_Os06g42990)
-5.48 0.78 -4.17 -1.9 -3.18 - -2.01 - -4.62 2.37 5.35 - - -2.74 - - - -6.93 - - - - - - - - - - - - - -4.58 - - - - - - - - - - - -5.57 -2.97 - -2.13 - -
LOC_Os07g07800.1 (LOC_Os07g07800)
1.61 1.04 -3.32 2.54 -2.13 0.96 0.68 -0.35 -4.19 -0.59 4.25 - -0.9 -1.74 - - 2.37 -0.99 - -1.79 - - - - 2.65 - - - - - - - - - - - - - - - - - - -1.5 - - - -2.01 -
LOC_Os07g20160.1 (LOC_Os07g20160)
0.26 3.35 - -3.3 - - -3.17 -2.17 -2.69 -1.92 4.63 - - -1.34 - - -1.44 0.15 - -0.67 -1.25 - -0.88 - 1.33 -0.2 - 0.27 -0.38 - - -1.28 - - - - - -0.18 - -4.37 -1.64 -1.69 -1.24 - -1.26 - - -1.59 -
LOC_Os07g46070.1 (LOC_Os07g46070)
0.19 2.2 -0.12 -2.33 - 2.84 -2.66 -2.65 1.06 -1.69 4.4 - - - - - -0.36 -1.7 1.41 -1.65 -1.85 - -2.92 -3.8 -0.16 - -1.63 -1.44 - - - -2.22 -1.39 - - -1.47 - - - -3.73 -2.6 -2.64 -2.47 -2.17 - -2.51 0.32 0.59 -1.7
LOC_Os08g16630.1 (LOC_Os08g16630)
-2.79 1.73 - - - 0.11 - - - 2.87 5.18 - - -1.03 - - - - - - - - - -4.95 - -1.39 - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os08g41030.1 (LOC_Os08g41030)
-8.4 -4.2 -7.08 -0.31 -5.3 - -4.13 -2.71 - 3.01 5.31 -2.5 -5.84 - - - -8.72 -10.3 - -9.68 - - - - - - -6.14 - - - - -6.24 - - - -4.94 - - - - - - - - - - - - -
-1.76 -0.38 - - - - 0.62 -3.6 -1.46 2.33 5.33 -4.96 - -5.61 - - -7.6 -5.49 - -6.31 - - - -5.69 -2.55 - - - - -4.55 - - - - - - - - - - -7.08 - - -3.54 -5.04 -2.61 -4.26 -4.18 -
3.29 1.11 0.72 - - - -1.81 -5.87 -3.18 3.33 4.62 - -3.92 -3.04 - - -4.85 -8.71 - -9.04 -9.44 -9.77 - - - - - - - - -5.9 -6.9 - - - - - - - -9.72 - - - -8.42 -5.38 -7.05 -6.1 - -
LOC_Os09g32290.2 (LOC_Os09g32290)
-0.34 1.16 -1.86 -7.69 -6.63 -7.5 2.57 2.47 2.08 1.79 2.84 -1.84 -0.29 1.03 -4.41 -3.68 -3.41 0.53 -3.69 -2.0 -6.25 -5.1 -5.87 -5.43 1.95 -3.04 -2.76 -4.95 -6.41 -5.6 -6.54 -6.05 -6.71 -6.47 -6.4 -7.57 -6.14 -6.77 -5.74 -9.27 -8.37 -7.96 -7.55 0.46 0.44 1.27 1.49 0.49 -1.26
LOC_Os09g36210.1 (LOC_Os09g36210)
-1.81 -1.6 -3.05 - -2.78 - - - -4.19 3.04 5.3 - - - - - -2.96 -5.02 - -5.42 -5.75 - - - - - - - - - - - - - - - - - - - - - - - - -3.5 - - -
LOC_Os10g35800.1 (LOC_Os10g35800)
-6.15 -4.0 -5.68 3.77 3.49 -1.45 1.17 1.48 -4.75 2.74 3.45 -7.0 - -8.94 -7.01 -6.0 - -7.0 -4.72 -3.75 -7.45 -6.68 -9.58 -8.95 -2.83 -6.33 -0.7 - - -8.17 -7.33 -8.42 -8.91 -7.74 -7.82 -8.14 - -7.16 -5.9 -12.37 -11.87 -12.09 - -6.5 -6.88 -8.51 -8.62 - -
LOC_Os10g41160.1 (LOC_Os10g41160)
-8.88 -4.26 -5.54 -8.92 -7.02 - -7.56 -9.77 -9.37 3.61 5.2 - - -8.94 - - -7.79 -9.88 - -7.88 - - -11.03 - - -7.7 - - - - - -9.47 - - - - - - - - - - -10.27 -6.97 - -6.01 - -8.05 -
LOC_Os11g34390.1 (LOC_Os11g34390)
2.21 1.19 -1.25 -2.15 -4.22 0.73 0.62 0.36 -0.88 2.04 4.24 -4.64 -2.24 -1.27 -6.88 -5.84 0.21 -1.55 1.41 -2.87 -5.96 -6.73 -5.44 -5.13 0.16 -7.18 -0.45 -5.68 -5.62 -5.23 -6.56 -5.85 -7.53 - - -5.16 -5.01 -4.93 -7.95 -9.26 -6.74 -7.87 -7.77 -1.73 -1.51 -1.33 1.29 0.37 0.52
LOC_Os12g04490.1 (LOC_Os12g04490)
0.92 2.15 0.14 -4.31 -5.28 -5.94 1.65 1.47 -3.43 -0.09 3.3 - 0.45 0.74 - - 1.54 -0.74 - -0.38 -0.79 -7.84 -1.0 -6.48 0.67 -5.07 - 0.1 -0.84 -2.03 -1.87 -2.76 -0.85 -2.22 -0.65 0.15 -0.27 -0.9 -0.46 -1.38 -1.75 -1.09 -0.97 0.73 -5.18 -5.61 0.69 0.65 0.32
-0.69 0.17 -3.15 2.56 1.95 1.17 0.13 0.32 -1.06 0.46 3.21 -7.62 -0.32 0.47 -1.38 -1.23 0.69 -0.18 1.16 -0.16 -2.79 -2.87 -2.76 -2.63 1.97 0.09 0.59 -2.33 -3.22 -3.25 -2.95 -2.27 -2.93 -3.82 -3.32 -3.02 -3.32 -3.01 -2.83 -3.33 -2.44 -3.06 -2.54 -0.33 -0.62 -0.69 -1.2 -1.46 -0.04
LOC_Os12g32080.1 (LOC_Os12g32080)
- 2.14 1.56 -0.85 - - 0.47 - - 1.88 5.12 - - - - - - -5.29 - -3.4 - - - - - 0.04 - - - - - - - - - - - - - - - - - -3.97 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.