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  5. LOC_Os01g66600.1

LOC_Os01g66600.1 (LOC_Os01g66600)


Aliases : LOC_Os01g66600

Description : Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana (sp|q56xr7|str4a_arath : 184.0)


Gene families : OG0003640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g66600.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00257490 TROL,... Photosynthesis.photophosphorylation.linear electron... 0.04 OrthoFinder output from all 47 species
AMTR_s01637p00008960 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G25480 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g057959 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.06 OrthoFinder output from all 47 species
Ala_g04556 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31831.t1 TROL, Aspi01Gene31831 protein involved in ferredoxin-NADP oxidoreductase... 0.02 OrthoFinder output from all 47 species
Ceric.04G103300.1 TROL, Ceric.04G103300 protein involved in ferredoxin-NADP oxidoreductase... 0.05 OrthoFinder output from all 47 species
Dcu_g13601 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.04 OrthoFinder output from all 47 species
Ehy_g09915 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.07 OrthoFinder output from all 47 species
Gb_07606 TROL TROL protein involved in ferredoxin-NADP oxidoreductase... 0.05 OrthoFinder output from all 47 species
MA_106219g0010 TROL TROL protein involved in ferredoxin-NADP oxidoreductase... 0.04 OrthoFinder output from all 47 species
Mp5g05200.1 TROL TROL protein involved in ferredoxin-NADP oxidoreductase... 0.14 OrthoFinder output from all 47 species
Ore_g45299 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.05 OrthoFinder output from all 47 species
Sam_g38045 No alias protein involved in ferredoxin-NADP oxidoreductase... 0.04 OrthoFinder output from all 47 species
Solyc01g095670.4.1 TROL, Solyc01g095670 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.06 OrthoFinder output from all 47 species
Solyc10g009570.3.1 TROL, Solyc10g009570 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.06 OrthoFinder output from all 47 species
Zm00001e028581_P003 Zm00001e028581 Rhodanese-like domain-containing protein 4A,... 0.3 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!