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  5. LOC_Os01g62780.1

LOC_Os01g62780.1 (LOC_Os01g62780)


Aliases : LOC_Os01g62780

Description : uridylyltransferase (HESO1)


Gene families : OG0002070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g62780.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene47994.t1 Aspi01Gene47994 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54172.t1 Aspi01Gene54172 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13766 No alias miRNA uridylyltransferase *(URT1) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo431350 No alias Protein HESO1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo439274 No alias Protein HESO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo442740 No alias RNA processing.RNA modification.uridylation.HESO1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004668 protein-arginine deiminase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009445 putrescine metabolic process IEP HCCA
BP GO:0009446 putrescine biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!