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  5. LOC_Os01g56590.1

LOC_Os01g56590.1 (LOC_Os01g56590)


Aliases : LOC_Os01g56590

Description : Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana (sp|f4ixw2|big5_arath : 83.2)


Gene families : OG0003804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g56590.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00038450 evm_27.TU.AmTr_v1... Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
AT5G27970 No alias ARM repeat superfamily protein 0.14 OrthoFinder output from all 47 species
Adi_g057715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12532 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05143 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g29508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60178.t1 Aspi01Gene60178 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60185.t1 Aspi01Gene60185 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G014700.1 Ceric.17G014700 not classified & original description: pacid=50618267... 0.07 OrthoFinder output from all 47 species
Cre13.g575250 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g23620 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g00991 No alias subgroup ERF-X transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01021873001 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.1 OrthoFinder output from all 47 species
Gb_33881 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.07 OrthoFinder output from all 47 species
Len_g12955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02462 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10436382g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp6g05240.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g14084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo443671 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.06 OrthoFinder output from all 47 species
Solyc09g018340.2.1 Solyc09g018340 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc09g018370.4.1 Solyc09g018370 Brefeldin A-inhibited guanine nucleotide-exchange... 0.12 OrthoFinder output from all 47 species
Tin_g20585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019674_P001 Zm00001e019674 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e019681_P002 Zm00001e019681 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR032691 Mon2/Sec7/BIG1-like_HUS 198 354
IPR032629 DCB_dom 3 168
IPR032817 Mon2_C 743 999
IPR032817 Mon2_C 1152 1435
IPR015403 Mon2/Sec7/BIG1-like_HDS 659 735
No external refs found!