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  5. LOC_Os01g55740.1

LOC_Os01g55740.1 (RBL12, ATRBL12, LOC_Os01g55740)


Aliases : RBL12, ATRBL12, LOC_Os01g55740

Description : protease (RBL)


Gene families : OG0006984 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55740.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g06335 RBL12, ATRBL12 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G007700.1 Ceric.32G007700 protease *(RBL) & original description: pacid=50597633... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 147 300
No external refs found!