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  5. LOC_Os01g55510.1

LOC_Os01g55510.1 (LOC_Os01g55510)


Aliases : LOC_Os01g55510

Description : Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii (sp|q39580|dyl1_chlre : 82.8)


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55510.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00158800 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G52245 No alias No description available 0.05 OrthoFinder output from all 47 species
AT4G27360 No alias Dynein light chain type 1 family protein 0.02 OrthoFinder output from all 47 species
Adi_g057643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g45425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32570.t1 Aspi01Gene32570 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32571.t1 Aspi01Gene32571 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40803.t1 Aspi01Gene40803 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32678 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Dcu_g01511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22163 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01014353001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_22193 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g56367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432415g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8723088g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g29928 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30327 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g15954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017907 No alias light chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018319 No alias not classified & original description: CDS=791-1699 0.02 OrthoFinder output from all 47 species
Smo159382 No alias Dynein 8 kDa light chain, flagellar outer arm... 0.01 OrthoFinder output from all 47 species
Solyc12g006630.2.1 Solyc12g006630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g34772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014218_P001 Zm00001e014218 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 5 89
No external refs found!