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  5. LOC_Os01g54119.1

LOC_Os01g54119.1 (GC1, LOC_Os01g54119)


Aliases : GC1, LOC_Os01g54119

Description : golgin (GC1)


Gene families : OG0005613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g54119.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00101740 GC1,... Vesicle trafficking.target membrane tethering.Golgi... 0.06 OrthoFinder output from all 47 species
Adi_g012571 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g08195 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g21464 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01015314001 GC1 Vesicle trafficking.target membrane tethering.Golgi... 0.03 OrthoFinder output from all 47 species
Gb_23096 GC1 golgin (GC1) 0.04 OrthoFinder output from all 47 species
Len_g36025 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g04906 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.04 OrthoFinder output from all 47 species
MA_10087857g0010 GC1 golgin (GC1) 0.02 OrthoFinder output from all 47 species
MA_110983g0010 GC1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_364285g0010 GC1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8605956g0010 GC1 Golgin candidate 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g36297 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g02316 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.07 OrthoFinder output from all 47 species
Smo405724 GC1 Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
Solyc12g008390.3.1 GC1, Solyc12g008390 golgin (GC1) 0.03 OrthoFinder output from all 47 species
Spa_g12754 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e019844_P001 GC1, Zm00001e019844 golgin (GC1) 0.09 OrthoFinder output from all 47 species
Zm00001e029063_P003 GC1, Zm00001e029063 golgin (GC1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007030 Golgi organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR019177 Golgin_subfamily_A_member_5 427 683
No external refs found!