Aliases : AMY3, ATAMY3, LOC_Os01g51754
Description : alpha amylase
Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os01g51754.1 | |
Cluster | HCCA: Cluster_77 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene38425.t1 | AMY2, ATAMY2,... | alpha amylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_02250 | AMY3, ATAMY3 | alpha amylase | 0.02 | OrthoFinder output from all 47 species | |
Mp1g24800.1 | AMY1, ATAMY1 | alpha amylase | 0.02 | OrthoFinder output from all 47 species | |
Ore_g00848 | AMY2, ATAMY2 | alpha amylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g02338 | AMY2, ATAMY2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g20513 | AMY3, ATAMY3 | alpha amylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g30556 | AMY3, ATAMY3 | alpha amylase & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEA | Interproscan |
MF | GO:0004556 | alpha-amylase activity | IEA | Interproscan |
MF | GO:0005509 | calcium ion binding | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
BP | GO:0022406 | membrane docking | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048278 | vesicle docking | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051640 | organelle localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140029 | exocytic process | IEP | HCCA |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
No external refs found! |