Aliases : LOC_Os01g48720
Description : component RPC82 of TFIIIe transcription factor complex
Gene families : OG0003612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os01g48720.1 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G49000 | No alias | RNA polymerase III subunit RPC82 family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g011919 | No alias | component *(NRPC13/RPC82) of TFIIIe transcription factor... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g10757 | No alias | component *(NRPC13/RPC82) of TFIIIe transcription factor... | 0.02 | OrthoFinder output from all 47 species | |
MA_159g0010 | No alias | component RPC82 of TFIIIe transcription factor complex | 0.03 | OrthoFinder output from all 47 species | |
Mp5g03850.1 | No alias | component RPC82 of TFIIIe transcription factor complex | 0.03 | OrthoFinder output from all 47 species | |
Msp_g06835 | No alias | component *(NRPC13/RPC82) of TFIIIe transcription factor... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g14353 | No alias | component *(NRPC13/RPC82) of TFIIIe transcription factor... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g24889 | No alias | component *(NRPC13/RPC82) of TFIIIe transcription factor... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint signaling | IEP | HCCA |
BP | GO:0000077 | DNA damage checkpoint signaling | IEP | HCCA |
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0030896 | checkpoint clamp complex | IEP | HCCA |
BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0042770 | signal transduction in response to DNA damage | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | HCCA |
No external refs found! |