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  5. LOC_Os01g48280.1

LOC_Os01g48280.1 (UBC13A, UBC35, LOC_Os01g48280)


Aliases : UBC13A, UBC35, LOC_Os01g48280

Description : ubiquitin-conjugating E2 protein


Gene families : OG0002491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g48280.1

Target Alias Description ECC score Gene Family Method Actions
AT1G78870 UBC13A, UBC35 ubiquitin-conjugating enzyme 35 0.05 OrthoFinder output from all 47 species
Adi_g006308 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g049682 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00696 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01942 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14112.t1 UBC13A, UBC35,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g025072 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description:... 0.03 OrthoFinder output from all 47 species
Len_g15482 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c15_22530V3.1 UBC13A, UBC35,... ubiquitin-conjugating enzyme 36 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016475 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description:... 0.04 OrthoFinder output from all 47 species
Solyc07g062570.3.1 UBC13A, UBC35,... ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species
Solyc10g007260.3.1 UBC13A, UBC35,... ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g08238 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25235 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020191_P001 UBC13A, UBC35,... ubiquitin-conjugating E2 protein 0.08 OrthoFinder output from all 47 species
Zm00001e028041_P001 UBC13A, UBC35,... ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 9 145
No external refs found!