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  5. LOC_Os01g46870.1

LOC_Os01g46870.1 (CRF1, LOC_Os01g46870)


Aliases : CRF1, LOC_Os01g46870

Description : transcription factor (ERF)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g46870.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g084219 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g02077 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g48888 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19913 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07735.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63782.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014331 ATERF13, ERF13, EREBP not classified & original description: CDS=134-1000 0.02 OrthoFinder output from all 47 species
Cba_g08443 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Ceric.09G047100.1 CRF3, Ceric.09G047100 subgroup ERF-VI transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.37G020100.1 Ceric.37G020100 subgroup ERF-X transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g19647 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_26419 DRN-LIKE, ESR2,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os02g43820.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08460.1 RAP2.12, LOC_Os03g08460 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
LOC_Os05g36100.1 ERF110, LOC_Os05g36100 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_425410g0010 No alias Ethylene-responsive transcription factor RAP2-13... 0.03 OrthoFinder output from all 47 species
MA_502153g0010 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Ore_g38776 ERF-1, ATERF-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26105 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pnu_g20605 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26646 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pnu_g27452 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32187 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g07476 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024985 CRF3 subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g25987 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc01g090340.3.1 ATERF13, ERF13,... Ethylene-responsive transcription factor 13... 0.03 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g10938 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g42439 RAP2.9, DEAR5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11988 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007332_P001 Zm00001e007332 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e013927_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e023157_P001 Zm00001e023157 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e025064_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 101 151
No external refs found!