Heatmap: Cluster_109 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g14250.1 (LOC_Os01g14250)
2.89 3.18 1.23 -0.77 -1.18 1.19 -2.67 -3.67 -0.27 -2.91 1.28 - 0.68 3.69 - - -2.93 2.67 - -1.93 - - - - - -0.55 - - - - - -0.78 - - - - - - - - - - -3.38 -3.36 - -1.09 - - -
LOC_Os01g46210.1 (LOC_Os01g46210)
3.6 0.74 5.01 - -2.36 - 0.11 -0.19 - -3.92 -0.79 - - - - - - -5.1 - - - - - - - -3.47 - - - - - -5.1 - - - - - - - - - - - - -3.4 - - - -
3.65 1.32 2.22 -2.4 -2.83 -6.0 -1.9 -2.45 -1.33 0.13 1.07 -3.69 -0.74 0.66 - - 0.3 -1.19 0.27 - - - -9.92 - - -6.67 - - - - - -7.3 - - - - - - - - -10.21 - - -3.23 -5.28 0.04 -0.52 1.59 3.89
LOC_Os01g58600.1 (LOC_Os01g58600)
2.82 1.7 4.14 - - -1.99 2.32 0.17 - 3.08 2.57 - -2.99 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -3.24 - - - - -
LOC_Os01g62000.1 (LOC_Os01g62000)
2.71 2.77 2.53 - 0.68 -0.06 -1.58 0.48 1.0 -0.73 -2.03 0.06 - - - 0.46 - -6.18 - -4.14 -4.94 - - - 4.21 - - - - - - - - - - - - - - - - - - -1.54 - -1.32 -0.15 - -
LOC_Os02g03800.1 (LOC_Os02g03800)
4.66 0.74 4.07 - -3.72 -3.56 0.84 -0.11 -6.79 -0.0 0.41 -6.54 - - - - -8.37 -4.31 - -5.88 -7.51 -6.48 -7.53 -7.33 - - - - - - -5.25 - - - - - - - - - - - - - - - - - -
LOC_Os02g03810.1 (LOC_Os02g03810)
4.79 3.35 0.25 - - - -0.23 - 1.48 - -0.19 - - -1.19 - - -0.18 -3.73 - -5.76 - - - - - - - - - - - - - - - - - - - - - - - -2.06 - - 1.94 - -
LOC_Os02g04190.1 (LOC_Os02g04190)
4.68 1.63 3.41 -10.42 -5.77 -6.06 1.38 -0.5 - -3.6 2.63 - - - - - -10.06 - - - - - - - - -7.75 - - - - - - - - - - - - - -10.88 - - - -7.76 - - - - -
LOC_Os02g07495.1 (LOC_Os02g07495)
3.65 0.87 4.29 -2.33 1.81 -1.64 2.48 2.04 - -4.75 0.37 - - - - - - - - - - - - - - - - - - - - -4.7 - - - - - - - - - - - - - - - - -
LOC_Os02g12280.1 (LOC_Os02g12280)
3.79 0.36 4.05 - -4.42 -2.77 0.4 -0.36 -0.89 - -0.92 -3.43 - - 3.03 1.93 -4.29 -1.94 - -3.25 -5.39 -2.81 -5.63 - - - - - - - - - - - - - - - - - -3.85 -3.99 -2.23 -1.89 -0.43 - - - -
LOC_Os02g13450.1 (LOC_Os02g13450)
2.49 -0.15 5.23 - -3.46 - -0.03 0.1 - - -3.26 -4.88 - - - - - - - -0.57 - - - - - -0.89 - - - - - - - - - - - - - - - - - - 0.11 -1.47 - - -
LOC_Os02g15730.1 (LOC_Os02g15730)
3.27 0.94 4.82 - - -1.25 1.47 0.47 - 0.18 1.82 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -6.45 - - - - -
LOC_Os02g18750.1 (LOC_Os02g18750)
4.95 1.45 3.18 -2.86 -0.37 -5.04 1.41 -0.51 0.71 -5.77 -2.99 - - - - - -9.81 -4.11 - - - - - - - - -6.45 - - - - -8.25 - - - - - - - - - - - -7.44 -6.64 -4.79 - - -
LOC_Os02g49540.1 (LOC_Os02g49540)
3.5 1.21 4.6 1.47 -1.97 - 1.56 1.52 - - -0.62 -4.15 - -2.6 - - -4.35 -2.7 - -6.58 - - - -4.75 - - - - - - - - - - - - - - - - - - - -2.53 -0.82 -3.25 -1.73 - -
LOC_Os02g53590.1 (LOC_Os02g53590)
2.72 0.85 5.0 - -2.98 - -0.25 0.3 -1.84 -2.1 1.4 -2.62 - 0.94 - - -4.13 -4.52 - - -3.18 -4.91 -2.63 - - - - - -1.31 -2.27 - -2.08 - - - - - - - - -6.19 -5.19 - - - - - - -
LOC_Os02g53600.1 (LOC_Os02g53600)
3.64 0.84 4.88 -5.63 - -3.87 0.82 0.85 - - 0.38 -5.4 - - - - - - - - - - - - -1.97 - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os02g56870.1 (LOC_Os02g56870)
4.02 1.73 4.12 - - - 2.43 0.62 0.15 -4.4 -1.03 0.52 - - - - -4.31 -4.61 - - - -4.75 - -3.96 - - - - -0.37 - - - - - - -0.93 - - - - - - - -3.51 - -2.01 - -1.58 -
LOC_Os03g01614.1 (LOC_Os03g01614)
2.79 2.77 1.77 -0.96 -2.29 -0.16 1.9 2.11 0.63 -3.72 -1.5 - 1.67 1.67 - - 3.54 0.84 - -2.94 - - - - - - - - - - - - - - - - - - - - - - - -1.94 - - - - -
LOC_Os03g11170.1 (LOC_Os03g11170)
2.08 -0.16 5.04 -4.87 -2.28 -1.1 2.11 1.16 -4.41 - 1.5 - - -3.48 - - - -6.92 - -4.26 - - - - - -2.94 -1.83 - - - - - - - - - - - - - - - - -2.17 - - - - -
3.68 3.98 3.57 - -0.9 1.89 -0.51 -0.5 - - 1.34 - - - - - -1.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g27580.1 (LOC_Os03g27580)
4.36 1.48 3.54 - - - -1.58 -1.38 - - -8.35 - - - - - - - 3.71 - - - - - - - - - - - - - - - - - - - - - -6.74 - - - -3.6 -1.96 - - -
LOC_Os03g56682.1 (LOC_Os03g56682)
4.99 1.23 3.65 - - - - -0.96 0.18 - - - - - - - - -1.84 - - - - - - - - - - - - - - - - - - - - - - - - - -1.65 - - - - -
LOC_Os04g11962.1 (LOC_Os04g11962)
1.94 -2.08 1.27 -2.25 - -2.83 - - -1.23 - 0.47 - 3.04 2.89 - - - 0.7 - -3.71 -0.05 -5.39 -0.71 - - - - 0.93 -0.06 -1.1 0.28 -0.64 -2.17 - 0.58 1.36 0.06 0.29 -0.81 -1.22 0.1 0.09 0.78 - -0.57 -0.75 -0.68 -0.4 1.14
LOC_Os04g22230.1 (LOC_Os04g22230)
4.32 0.63 4.01 -2.52 - 0.56 0.1 0.83 2.57 - -1.92 - - -0.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os04g22340.1 (LOC_Os04g22340)
3.73 0.62 4.52 1.5 -1.87 1.69 -4.18 -1.86 -1.7 - -3.54 - - - 0.2 - - - - -2.36 - - - - - 0.48 -0.09 - - - - -2.88 - - - - - - - - - - - - - -1.6 - - -
LOC_Os04g50750.1 (LOC_Os04g50750)
3.94 1.67 4.26 -1.69 -1.29 -2.26 1.08 1.15 -0.51 -0.01 -0.26 -1.62 - -3.03 -0.49 - -0.08 -3.11 - -8.64 - -5.34 - - - - - - - - - -3.57 - - - - - - - - - -4.59 - -5.56 -1.86 - - -1.21 -1.46
LOC_Os05g02620.1 (LOC_Os05g02620)
3.61 1.32 3.91 -1.06 2.14 - 0.73 0.86 -2.84 0.89 1.73 - - -1.85 - 1.14 - -3.36 - - - -4.4 - - - - - - - - - - - - - -1.06 - - - - - - - - -0.49 0.79 - - -
LOC_Os05g02630.1 (LOC_Os05g02630)
4.48 0.63 3.73 -5.31 -7.73 -5.45 2.69 2.01 -5.36 -6.36 0.15 -5.97 - -5.48 - - - -4.92 - - - - - - - - - - - -4.87 - -7.03 -4.87 - - - - - -5.3 - -8.81 - - - - -5.84 - - -
LOC_Os05g28810.1 (LOC_Os05g28810)
4.42 2.07 4.05 - - -2.21 2.06 1.24 - - -3.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os05g30470.1 (LOC_Os05g30470)
4.17 -0.13 4.42 -6.34 -3.88 -6.55 1.86 1.26 -6.59 -5.86 1.3 - - -8.37 - - -9.41 - - -13.94 - - - -9.22 - - - - - - - -6.58 - - - - - - - - - - - -7.9 - - - - -
LOC_Os05g48710.1 (LOC_Os05g48710)
2.71 -1.63 -1.04 4.29 1.56 -1.15 0.82 1.47 - -0.6 1.16 - -1.3 3.39 - -4.2 - -8.76 - -4.7 -6.04 - - - - - - -4.14 - - -5.65 -4.85 - - - - - - - -6.3 -8.99 -6.52 -6.59 -4.4 - - - - -
LOC_Os06g11308.1 (LOC_Os06g11308)
3.24 1.86 3.61 0.25 0.23 0.62 3.76 2.15 - - - -0.67 - - - - - -1.31 - - - - - -2.75 - - - - - - - -0.96 - - - - - - - -2.58 - - - - - - - - -
LOC_Os06g35660.1 (LOC_Os06g35660)
4.11 0.8 4.38 -4.24 -3.4 - 1.35 0.63 -3.27 -0.52 1.56 -3.71 - - - - -4.86 -6.23 - -7.72 - -6.78 -6.55 - - -3.19 - - - - - -3.01 - - - - - - - -6.85 - - - -1.55 -3.72 -2.51 -2.56 - -
LOC_Os06g47390.1 (LOC_Os06g47390)
3.89 4.08 3.73 - - - - 2.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os06g48690.1 (LOC_Os06g48690)
3.16 1.25 5.05 - - 0.11 - - - 0.48 0.68 -0.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.66 2.17 4.42 -1.65 -1.64 -2.32 1.8 1.88 -4.2 -5.91 -3.42 -3.22 -2.65 -0.46 -3.54 -1.51 -3.52 -3.0 - -4.59 -6.34 -7.23 -4.34 -6.16 -3.47 - - -1.46 -1.25 -2.42 -0.82 -1.74 -4.61 -3.25 -3.58 - - - -2.74 -2.58 -4.02 -1.59 -2.83 -0.53 -0.73 -1.49 0.87 -1.72 -
LOC_Os07g18460.1 (LOC_Os07g18460)
3.28 3.26 3.68 -1.62 - 0.97 1.1 1.16 -0.01 - 0.96 -0.03 - - - - - - - - -2.14 -0.82 -2.46 -1.05 - - - - - - - 1.99 - - - - - - - - -0.62 - -2.05 - - - - - -
LOC_Os07g29060.1 (LOC_Os07g29060)
2.32 3.9 -1.07 -0.22 - 0.38 - - -1.79 - 0.46 - - -2.2 - - -4.62 0.48 - - 0.4 -5.0 - - - - - 0.03 0.58 -0.21 - 0.42 0.91 -0.67 0.56 -1.22 1.38 0.46 0.63 0.06 0.25 1.23 1.35 - - - - - -
LOC_Os07g48650.1 (LOC_Os07g48650)
4.47 1.5 3.8 -4.5 -4.52 -3.34 2.06 2.17 -5.53 -3.11 -0.58 -5.35 - - - - -6.17 - - - - - - - -2.54 - - - - - - -3.32 - - - - - - - - - - - -7.64 - - -3.2 - -
LOC_Os08g02960.1 (LOC_Os08g02960)
3.74 3.99 - 2.7 - - - - - - - - 3.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os08g31740.1 (LOC_Os08g31740)
3.68 1.56 0.2 -0.64 -0.89 3.93 2.64 1.64 -2.45 -1.89 1.71 -1.31 -2.25 -2.79 - - -3.86 -2.89 - -5.6 -4.96 -6.37 -5.02 -3.87 - - - - -3.06 -1.89 -1.93 -2.92 - - - -2.99 - - - -6.39 -5.66 -5.54 -4.66 -4.13 - - -2.3 -2.4 -
LOC_Os08g35180.1 (LOC_Os08g35180)
4.15 3.22 2.48 - - - 1.74 2.1 - - -6.18 - - 2.42 - - - -1.41 - - -2.56 - - -2.38 - 0.26 - - - - - - - - - - 0.47 - - - - - - - - - - - -
LOC_Os09g02160.1 (LOC_Os09g02160)
4.37 1.34 3.69 -3.76 - -1.11 2.67 2.31 -2.0 -2.75 -2.94 -4.11 -3.41 -3.32 - - - -2.82 - -6.71 - -4.53 - -5.01 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os10g19904.1 (LOC_Os10g19904)
1.5 -0.58 5.31 - -1.87 -2.8 0.8 -1.69 - -4.46 1.33 -3.3 -1.93 -3.13 - - - -2.11 - - -6.84 -8.29 -8.03 -5.37 - - - - - - - - - - - - - - - - -8.13 - - - - - -3.68 - -
LOC_Os10g20560.1 (LOC_Os10g20560)
1.65 -0.93 5.36 - -0.91 - 1.33 -0.54 - - -0.75 - - - - - - - - - - - - - - - - - - - - -3.83 - - - - - - - - - - - - - - - - -
LOC_Os10g21640.1 (LOC_Os10g21640)
2.36 2.96 -1.46 2.32 - - - - - -1.97 -0.22 - 3.18 3.65 - - 2.41 1.37 - - - - -2.91 - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os11g07530.1 (LOC_Os11g07530)
3.65 3.68 1.2 2.71 - 2.36 1.22 0.71 1.14 -1.6 -1.91 - -0.48 - - - -1.56 - - - - -0.91 -2.5 - - - - - - - - - - - - - - - - - - - - - - 0.13 - - -
LOC_Os11g11680.1 (LOC_Os11g11680)
3.65 -0.87 4.95 - -3.64 -2.98 1.46 0.07 -3.59 -4.74 -1.81 - -4.34 - - -2.35 - -6.58 - -6.55 - - - - - - - - - - - - - - -3.16 - - - - -6.04 - - - -3.37 - - -2.96 - -
LOC_Os11g39910.1 (LOC_Os11g39910)
4.22 0.95 3.16 - 2.39 - 2.68 2.72 - - 0.03 -1.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os12g41790.1 (LOC_Os12g41790)
0.84 -1.55 4.3 -1.31 1.72 -0.23 -0.54 -1.54 -3.86 3.99 2.36 -3.26 - -4.65 - - -2.57 -4.32 - -4.17 - -6.08 - -7.02 - - - - - - - - - - - - - - - - - - -5.59 - -3.88 - - - -
LOC_Os12g42290.1 (LOC_Os12g42290)
4.05 2.05 4.27 - -1.28 - 0.72 1.21 -1.41 -4.1 -2.44 - - - - - - -3.56 - -6.58 - -3.37 -4.12 1.18 - - - - - - - - - - - - - - - -4.52 - - - -4.55 -0.94 - - -0.03 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.