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  5. LOC_Os01g44360.1

LOC_Os01g44360.1 (LOC_Os01g44360)


Aliases : LOC_Os01g44360

Description : CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana (sp|q9lev3|cbsx3_arath : 173.0)


Gene families : OG0003340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g44360.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00238620 evm_27.TU.AmTr_v1... CBS domain-containing protein CBSX3, mitochondrial... 0.05 OrthoFinder output from all 47 species
AT1G47271 No alias Cystathionine beta-synthase (CBS) family protein 0.08 OrthoFinder output from all 47 species
Solyc04g080510.3.1 Solyc04g080510 CBS domain-containing protein CBSX3, mitochondrial... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 131 173
IPR000644 CBS_dom 184 239
No external refs found!