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  5. LOC_Os01g21560.1

LOC_Os01g21560.1 (LOC_Os01g21560)


Aliases : LOC_Os01g21560

Description : Caffeoylshikimate esterase OS=Arabidopsis thaliana (sp|q9c942|cse_arath : 151.0)


Gene families : OG0000105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g21560.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT1G52760 LysoPL2 lysophospholipase 2 0.03 OrthoFinder output from all 47 species
AT3G62860 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g03041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12606 No alias monoacylglycerol lipase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23336 No alias monoacylglycerol lipase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17046.t1 LysoPL2, Aspi01Gene17046 caffeoyl shikimate esterase *(CSE) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14732 LysoPL2 caffeoyl shikimate esterase *(CSE) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00823 No alias monoacylglycerol lipase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06926 LysoPL2 caffeoyl shikimate esterase *(CSE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017214001 LysoPL2 Caffeoylshikimate esterase OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g08080 LysoPL2 caffeoyl shikimate esterase *(CSE) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10891 No alias monoacylglycerol lipase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10126084g0010 No alias monoacylglycerol lipase 0.02 OrthoFinder output from all 47 species
MA_10432738g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_62368g0010 No alias monoacylglycerol lipase 0.02 OrthoFinder output from all 47 species
Ore_g28814 No alias monoacylglycerol lipase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29484 No alias monoacylglycerol lipase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0674.g027618 LysoPL2 not classified & original description: CDS=1-429 0.03 OrthoFinder output from all 47 species
Solyc05g056000.3.1 Solyc05g056000 Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e017526_P002 Zm00001e017526 monoacylglycerol lipase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022742 Hydrolase_4 59 299
No external refs found!