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  5. LOC_Os01g13700.1

LOC_Os01g13700.1 (LOC_Os01g13700)


Aliases : LOC_Os01g13700

Description : Uncharacterized protein At4g28440 OS=Arabidopsis thaliana (sp|o49453|y4844_arath : 184.0)


Gene families : OG0000766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g13700.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g075108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G006500.1 Ceric.24G006500 not classified & original description: pacid=50629948... 0.02 OrthoFinder output from all 47 species
Cre03.g208000 No alias Uncharacterized protein At4g28440 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g14156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_31185 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g00376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_122931g0010 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g00450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026137_P001 Zm00001e026137 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e028239_P001 Zm00001e028239 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!