LOC_Os01g08710.1 (ATWRKY13, WRKY13,...)

Aliases : ATWRKY13, WRKY13, LOC_Os01g08710

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g08710.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G46130	WRKY43, ATWRKY43	WRKY DNA-binding protein 43	0.02	OrthoFinder output from all 47 species
Adi_g058124	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01407	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g03082	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g28735	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06726	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene26528.t1	WRKY3, Aspi01Gene26528	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g18669	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g26162	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_164675g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g37337	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e040032_P002	WRKY44, TTG2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	135	191

External Links

No external refs found!

LOC_Os01g08710.1 (ATWRKY13, WRKY13,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation