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  5. LOC_Os01g08420.1

LOC_Os01g08420.1 (emb2410, LOC_Os01g08420)


Aliases : emb2410, LOC_Os01g08420

Description : component Tic236 of inner envelope TIC translocation system


Gene families : OG0003871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08420.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00090900 emb2410,... No description available 0.02 OrthoFinder output from all 47 species
AT2G25660 emb2410 embryo defective 2410 0.08 OrthoFinder output from all 47 species
Adi_g024958 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Aev_g04899 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ala_g14706 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Aop_g05251 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Aspi01Gene67709.t1 emb2410, Aspi01Gene67709 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G073200.1 emb2410, Ceric.14G073200 component *(Tic236) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Dcu_g04999 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Dde_g09822 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
GSVIVT01035727001 emb2410 No description available 0.05 OrthoFinder output from all 47 species
Gb_34395 emb2410 no description available(sp|w0ryd3|ssg4_orysj : 233.0) 0.05 OrthoFinder output from all 47 species
Gb_34396 emb2410 no description available(sp|f4isl7|ti236_arath : 109.0) 0.04 OrthoFinder output from all 47 species
Gb_34397 emb2410 no description available(sp|w0ryd3|ssg4_orysj : 250.0) 0.03 OrthoFinder output from all 47 species
MA_10434122g0010 emb2410 component Tic236 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
MA_196707g0010 emb2410 no description available(sp|f4isl7|ti236_arath : 243.0) 0.04 OrthoFinder output from all 47 species
Ore_g38227 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Pnu_g12183 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ppi_g32116 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Sam_g40556 No alias component *(Tic236) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Smo439584 emb2410 No description available 0.03 OrthoFinder output from all 47 species
Spa_g08438 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Zm00001e016691_P001 emb2410, Zm00001e016691 component Tic236 of inner envelope TIC translocation system 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009306 protein secretion IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007452 TamB 618 1005
No external refs found!