LOC_Os01g08170.1 (LOC_Os01g08170)


Aliases : LOC_Os01g08170

Description : no hits & (original description: none)


Gene families : OG0001127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08170.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00129500 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Adi_g009520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45461.t1 Aspi01Gene45461 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66885.t1 Aspi01Gene66885 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G013500.1 Ceric.30G013500 not classified & original description: pacid=50608285... 0.05 OrthoFinder output from all 47 species
Dac_g07486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005205001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_04948 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g18570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g23800.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g28569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026262 No alias not classified & original description: CDS=1-3285 0.02 OrthoFinder output from all 47 species
Spa_g26744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016722_P001 Zm00001e016722 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021319 DUF2921 54 1041
No external refs found!