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  5. LOC_Os01g07090.1

LOC_Os01g07090.1 (LOC_Os01g07090)


Aliases : LOC_Os01g07090

Description : photosynthetic acclimation PBCP phosphatase


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07090.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT2G30170 No alias Protein phosphatase 2C family protein 0.07 OrthoFinder output from all 47 species
Als_g32280 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g08345 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62676.t1 Aspi01Gene62676 phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68354 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Ceric.1Z173900.1 Ceric.1Z173900 phosphatase *(PBCP) & original description:... 0.06 OrthoFinder output from all 47 species
Cre06.g257850 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dcu_g33331 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g26968 No alias phosphatase *(PBCP) & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g02459 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024641001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
GSVIVT01029794001 No alias Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g20278 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17211 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05138 No alias phosphatase *(PBCP) & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g05276 No alias phosphatase *(PBCP) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g04619 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24669 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g105020.3.1 Solyc01g105020 Probable protein phosphatase 2C 71 OS=Oryza sativa... 0.1 OrthoFinder output from all 47 species
Solyc06g007350.4.1 Solyc06g007350 photosynthetic acclimation PBCP phosphatase 0.05 OrthoFinder output from all 47 species
Solyc12g005190.3.1 Solyc12g005190 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g28122 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016822_P004 Zm00001e016822 photosynthetic acclimation PBCP phosphatase 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 73 292
No external refs found!