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  5. LOC_Os01g01160.1

LOC_Os01g01160.1 (J20, LOC_Os01g01160)


Aliases : J20, LOC_Os01g01160

Description : Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana (sp|q9sdn0|dnj20_arath : 113.0)


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01160.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Aev_g09160 ATERDJ2A not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g13865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17595 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00729 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46028 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g52964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12797 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32051.t1 J20, Aspi01Gene32051 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38054.t1 J20, Aspi01Gene38054 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46427.t1 Aspi01Gene46427 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46427.t2 Aspi01Gene46427 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene56174.t1 Aspi01Gene56174 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61824.t1 Aspi01Gene61824 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61832.t1 Aspi01Gene61832 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015886 J20 not classified & original description: CDS=137-550 0.05 OrthoFinder output from all 47 species
Azfi_s0145.g051660 J20 not classified & original description: CDS=185-709 0.02 OrthoFinder output from all 47 species
Ceric.03G096700.1 J20, Ceric.03G096700 not classified & original description: pacid=50572177... 0.07 OrthoFinder output from all 47 species
Cre07.g346600 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g28384 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31910 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22715 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08216 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12164 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06583 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021014001 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01024057001 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_09518 ATDJC39, ARL2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22868 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g46222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09494 J20 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g21497 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_241669g0010 ERDJ3B, ATERDJ3B Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp4g17730.1 J20 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42656 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47539 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00317 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00356 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10196 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo441708 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g23072 ERDJ3B, ATERDJ3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017189_P001 J20, Zm00001e017189 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 55 118
No external refs found!